RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 UBALD1Q8TB05 177 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 DYRK2Q92630 601 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 POLE3Q9NRF9 147 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 EHFQ9NZC4 300 aa12.02□□□□□ -0.48
GPC1-209ENST00000495100 H3BUI4 141 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 ZNF208O43345 1280 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 LCATP04180 440 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 ASAH2BP0C7U1 165 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 OR3A4PP47883 348 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 SLC6A8P48029 635 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 SLC26A5P58743 744 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 MANEAQ5SRI9 462 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 ZNF721Q8TF20 911 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 UBL7Q96S82 380 aaPredicted RBP12.02□□□□□ -0.49
GPC1-209ENST00000495100 ICAM5Q9UMF0 924 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 MRPS28Q9Y2Q9 187 aaKnown RBP12.02□□□□□ -0.49
GPC1-209ENST00000495100 C2orf16Q68DN1 1984 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 A0A1B0GUH1 482 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 ZNF850A8MQ14 1090 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 NPIPA2E9PIF3 369 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 NPIPA3F8WFD2 350 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 SOCS1O15524 211 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 ZNF217O75362 1048 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 FCGR2AP12318 317 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 CD96P40200 585 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 SPIN3Q5JUX0 258 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 ZNF585AQ6P3V2 769 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 FAM122BQ7Z309 247 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 SUMF1Q8NBK3 374 aa12.02□□□□□ -0.49
GPC1-209ENST00000495100 LMO7DNF2Z398 122 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 PRAF2O60831 178 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 PIAS2O75928 621 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 SERPINA5P05154 406 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 EFNA3P52797 238 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 ZNF169Q14929 603 aaPredicted RBP12.01□□□□□ -0.49
GPC1-209ENST00000495100 MEX3BQ6ZN04 569 aaKnown RBP12.01□□□□□ -0.49
GPC1-209ENST00000495100 FAM71CQ8NEG0 241 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 OR5D14Q8NGL3 314 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 SCARF2Q96GP6 870 aaPredicted RBP12.01□□□□□ -0.49
GPC1-209ENST00000495100 GPHA2Q96T91 129 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 LAT2Q9GZY6 243 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 LANCL2Q9NS86 450 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 GPR160Q9UJ42 338 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 FREM1Q5H8C1 2179 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 hCG_1807616A0A1W2PRN6 198 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 NAP1L6A6NFF2 107 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 SLC17A2O00624 439 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 PRH1P02810 166 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 NME2P22392 152 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 PTBP1P26599 531 aaKnown RBP eCLIP12.01□□□□□ -0.49
GPC1-209ENST00000495100 ZNF121P58317 390 aaPredicted RBP12.01□□□□□ -0.49
GPC1-209ENST00000495100 MC2RQ01718 297 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 TAF9Q16594 264 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 CHRFAM7AQ494W8 412 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 TMPPEQ6ZT21 453 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 OR1N1Q8NGS0 311 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 ELP5Q8TE02 316 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 RAB3CQ96E17 227 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 SEH1LQ96EE3 360 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 C1orf198Q9H425 327 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 OPN4Q9UHM6 478 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 DKKL1Q9UK85 242 aa12.01□□□□□ -0.49
GPC1-209ENST00000495100 PLPP3O14495 311 aa12□□□□□ -0.49
GPC1-209ENST00000495100 SPRY1O43609 319 aaPredicted RBP12□□□□□ -0.49
GPC1-209ENST00000495100 OMGP23515 440 aa12□□□□□ -0.49
GPC1-209ENST00000495100 SERPINF1P36955 418 aa12□□□□□ -0.49
GPC1-209ENST00000495100 ANKRD16Q6P6B7 361 aa12□□□□□ -0.49
GPC1-209ENST00000495100 ADGRE4PQ86SQ3 457 aa12□□□□□ -0.49
GPC1-209ENST00000495100 GRAMD2AQ8IUY3 354 aa12□□□□□ -0.49
GPC1-209ENST00000495100 SLC25A45Q8N413 288 aa12□□□□□ -0.49
GPC1-209ENST00000495100 C2CD4CQ8TF44 421 aa12□□□□□ -0.49
GPC1-209ENST00000495100 DDIT4LQ96D03 193 aa12□□□□□ -0.49
GPC1-209ENST00000495100 SORCS2Q96PQ0 1159 aa12□□□□□ -0.49
GPC1-209ENST00000495100 ALKBH3Q96Q83 286 aaPredicted RBP12□□□□□ -0.49
GPC1-209ENST00000495100 UCN2Q96RP3 112 aa12□□□□□ -0.49
GPC1-209ENST00000495100 C20orf24Q9BUV8 137 aa12□□□□□ -0.49
GPC1-209ENST00000495100 PBOV1Q9GZY1 135 aa12□□□□□ -0.49
GPC1-209ENST00000495100 TAS2R8Q9NYW2 309 aa12□□□□□ -0.49
GPC1-209ENST00000495100 DUSP1P28562 367 aa12□□□□□ -0.49
GPC1-209ENST00000495100 TLE1Q04724 770 aa12□□□□□ -0.49
GPC1-209ENST00000495100 ZNF616Q08AN1 781 aa12□□□□□ -0.49
GPC1-209ENST00000495100 PHLDA2Q53GA4 152 aa12□□□□□ -0.49
GPC1-209ENST00000495100 GTPBP8Q8N3Z3 284 aaPredicted RBP12□□□□□ -0.49
GPC1-209ENST00000495100 SMRP1Q8NCR6 262 aa12□□□□□ -0.49
GPC1-209ENST00000495100 GPR173Q9NS66 373 aa12□□□□□ -0.49
GPC1-209ENST00000495100 OR5H15A6NDH6 313 aa12□□□□□ -0.49
GPC1-209ENST00000495100 FRG2CA6NGY1 282 aa12□□□□□ -0.49
GPC1-209ENST00000495100 CCL2P13500 99 aa12□□□□□ -0.49
GPC1-209ENST00000495100 RRADP55042 308 aa12□□□□□ -0.49
GPC1-209ENST00000495100 RIN1Q13671 783 aa12□□□□□ -0.49
GPC1-209ENST00000495100 TSPO2Q5TGU0 170 aa12□□□□□ -0.49
GPC1-209ENST00000495100 SLC25A28Q96A46 364 aa12□□□□□ -0.49
GPC1-209ENST00000495100 MED30Q96HR3 178 aa12□□□□□ -0.49
GPC1-209ENST00000495100 PELOQ9BRX2 385 aaKnown RBP12□□□□□ -0.49
GPC1-209ENST00000495100 HDHD3Q9BSH5 251 aaPredicted RBP12□□□□□ -0.49
GPC1-209ENST00000495100 ZNF426Q9BUY5 554 aa12□□□□□ -0.49
GPC1-209ENST00000495100 TMEM59Q9BXS4 323 aa12□□□□□ -0.49
GPC1-209ENST00000495100 GDF2Q9UK05 429 aaPredicted RBP12□□□□□ -0.49
GPC1-209ENST00000495100 HRH3Q9Y5N1 445 aa12□□□□□ -0.49
GPC1-209ENST00000495100 C3orf80F5H4A9 247 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 607.5 ms