RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 DIMT1Q9UNQ2 313 aaKnown RBP11.4□□□□□ -0.58
HDAC1-208ENST00000482310 STARD10Q9Y365 291 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 TPRKBQ9Y3C4 175 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 CSMD1Q96PZ7 3565 aa11.4□□□□□ -0.58
HDAC1-208ENST00000482310 TMEM269A0A1B0GVZ9 245 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 LOC110117498-PIK3R3F6TDL0 507 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 HS3ST1O14792 307 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 MYL12BO14950 172 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 MT-ND2P03891 347 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 LIMS3P0CW19 117 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 LIMS4P0CW20 117 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 PIPP12273 146 aaPredicted RBP11.39□□□□□ -0.59
HDAC1-208ENST00000482310 CRHBPP24387 322 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 DCKP27707 260 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 SSTR2P30874 369 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 RAD52P43351 418 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 PSMA6P60900 246 aaKnown RBP11.39□□□□□ -0.59
HDAC1-208ENST00000482310 EGR3Q06889 387 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 GALEQ14376 348 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 MSMPQ1L6U9 139 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF829Q3KNS6 432 aaPredicted RBP11.39□□□□□ -0.59
HDAC1-208ENST00000482310 KRTAP27-1Q3LI81 207 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 RBM48Q5RL73 367 aaKnown RBP11.39□□□□□ -0.59
HDAC1-208ENST00000482310 LIPNQ5VXI9 398 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 DRAM2Q6UX65 266 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 LRP11Q86VZ4 500 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 COMMD2Q86X83 199 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 SPRYD4Q8WW59 207 aaPredicted RBP11.39□□□□□ -0.59
HDAC1-208ENST00000482310 MYDGFQ969H8 173 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 FBXW5Q969U6 566 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 PPP1R14AQ96A00 147 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 DCLRE1CQ96SD1 692 aaKnown RBP11.39□□□□□ -0.59
HDAC1-208ENST00000482310 BCL2L14Q9BZR8 327 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 CHCHD3Q9NX63 227 aaKnown RBP11.39□□□□□ -0.59
HDAC1-208ENST00000482310 DUSP13Q9UII6 198 aa11.39□□□□□ -0.59
HDAC1-208ENST00000482310 EXOSC1Q9Y3B2 195 aaKnown RBP11.39□□□□□ -0.59
HDAC1-208ENST00000482310 RGS10O43665 173 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 ATE1O95260 518 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 CLPTM1O96005 669 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 CDK1P06493 297 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 OR4A8P0C604 315 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 PCSK6P29122 969 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 OTX1P32242 354 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-208ENST00000482310 MPV17P39210 176 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 CDH15P55291 814 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 RPS23P62266 143 aaKnown RBP11.38□□□□□ -0.59
HDAC1-208ENST00000482310 ACTA2P62736 377 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 ACTG2P63267 376 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 CSNK2BP67870 215 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 NKX6-1P78426 367 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-208ENST00000482310 ROM1Q03395 351 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 TIGD6Q17RP2 521 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 CDONQ4KMG0 1287 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 GLYATL3Q5SZD4 288 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 BCL2L15Q5TBC7 163 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 KLHL36Q8N4N3 616 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 OR8B12Q8NGG6 310 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 TMEM171Q8WVE6 324 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 IPCEF1Q8WWN9 437 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-208ENST00000482310 GATAD2BQ8WXI9 593 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 APOBEC3DQ96AK3 386 aaPredicted RBP11.38□□□□□ -0.59
HDAC1-208ENST00000482310 C14orf79Q96F83 325 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 MRPL48Q96GC5 212 aaKnown RBP11.38□□□□□ -0.59
HDAC1-208ENST00000482310 DHRS9Q9BPW9 319 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 C1QTNF5Q9BXJ0 243 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 LIME1Q9H400 295 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 INPP5EQ9NRR6 644 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 FKBP14Q9NWM8 211 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 BLOC1S6Q9UL45 172 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 SLC22A13Q9Y226 551 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 CMAHPQ9Y471 501 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 R4GMQ9 66 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 ABCA12Q86UK0 2595 aa11.38□□□□□ -0.59
HDAC1-208ENST00000482310 PNMA8CA0A1B0GUJ8 204 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 A0A1W2PPW3 197 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 FAM221AA4D161 298 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF254O75437 659 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 GOSR1O95249 250 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 PNPP00491 289 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 CCDC159P0C7I6 412 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 GCH1P30793 250 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 GLRXP35754 106 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 MAP2K4P45985 399 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 RGS6P49758 472 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 SLC35A2P78381 396 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 MALLQ13021 153 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 ADIPOQQ15848 244 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 MRPL21Q7Z2W9 205 aaKnown RBP11.37□□□□□ -0.59
HDAC1-208ENST00000482310 KLBQ86Z14 1044 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 OR5AS1Q8N127 324 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 FBXL14Q8N1E6 418 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 ZFP41Q8N8Y5 198 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 OR5L1Q8NGL2 311 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 RORBQ92753 470 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 SIGLEC11Q96RL6 698 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 ZNF649Q9BS31 505 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 MRPL37Q9BZE1 423 aaKnown RBP11.37□□□□□ -0.59
HDAC1-208ENST00000482310 PBOV1Q9GZY1 135 aa11.37□□□□□ -0.59
HDAC1-208ENST00000482310 OR10A2Q9H208 303 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms