RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 KAAG1Q9UBP8 84 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 RASD1Q9Y272 281 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 TMED7Q9Y3B3 224 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 KCNE3Q9Y6H6 103 aa3.98□□□□□ -1.77
SBDSP1-204ENST00000453858 TRBV5-3A0A0A0MS03 114 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 LOC102725191A0A1B0GVB3 256 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 PSMB11A5LHX3 300 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 HTR3EA5X5Y0 456 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 MAGEA13PA6NCF6 341 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 GAGE12JA6NER3 117 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 CCRL2O00421 344 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 ADAM20O43506 726 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 CRCPO75575 148 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 AGR2O95994 175 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 SNRPAP09012 282 aaKnown RBP3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 ETS2P15036 469 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 KITLGP21583 273 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 PAICSP22234 425 aaKnown RBP3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 AHCYP23526 432 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 PGM1P36871 562 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 MAGEA3P43357 314 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 FNTAP49354 379 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 CCNG1P51959 295 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 XGP55808 180 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 KCTD19Q17RG1 926 aaPredicted RBP3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 TBC1D28Q2M2D7 210 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 MRGPRG-AS1Q2M3A8 158 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 LGALS9BQ3B8N2 356 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 ATG16L1Q676U5 607 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 ZNF626Q68DY1 528 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 CFAP161Q6P656 301 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 ZCCHC12Q6PEW1 402 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 BAIAP2L2Q6UXY1 529 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 WDR88Q6ZMY6 472 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 CPOQ8IVL8 374 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 SLC22A24Q8N4F4 322 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 TEX9Q8N6V9 391 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 OR1J2Q8NGS2 313 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 OR8U1Q8NH10 309 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 C16orf78Q8WTQ4 265 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 DDIT4LQ96D03 193 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 OTUB1Q96FW1 271 aaPredicted RBP3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 SH3GL3Q99963 347 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 NAT10Q9H0A0 1025 aaKnown RBP3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 C1orf198Q9H425 327 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 METTL8Q9H825 291 aaKnown RBP3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 FARSBQ9NSD9 589 aaKnown RBP3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 SIGLEC8Q9NYZ4 499 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 MDFICQ9P1T7 246 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 OPTCQ9UBM4 332 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 RNF14Q9UBS8 474 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 PITPNC1Q9UKF7 332 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 APLNQ9ULZ1 77 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 DHDHQ9UQ10 334 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 CAPN7Q9Y6W3 813 aa3.97□□□□□ -1.77
SBDSP1-204ENST00000453858 DNAH8Q96JB1 4490 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 IGHV3-64DA0A0J9YX35 117 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 A0A1W2PPM1 405 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 WDR91A4D1P6 747 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 LRRC30A6NM36 301 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 FTCDNL1E5RQL4 147 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 H3BSH0 61 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 J3KRW8 73 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 RHODO00212 210 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 NDUFA2O43678 99 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 TIMM8AO60220 97 aaPredicted RBP3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 PCDH7O60245 1069 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 NPIPB7O75200 414 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 RHBDL1O75783 438 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 SERPINE1P05121 402 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 DUX4L4P0CJ87 422 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 OR3A4PP47883 348 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 CDX1P47902 265 aaPredicted RBP3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 PPP1CBP62140 327 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 TNFRSF9Q07011 255 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 MAB21L1Q13394 359 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 PTGR1Q14914 329 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 ZNF141Q15928 474 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 MAPK14Q16539 360 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 ALG10Q5BKT4 473 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 ALG10BQ5I7T1 473 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 PDZK1Q5T2W1 519 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 MZT2BQ6NZ67 158 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 ACP7Q6ZNF0 438 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 Q6ZR54 194 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 LHFPL4Q7Z7J7 247 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 ZER1Q7Z7L7 766 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 SGPP2Q8IWX5 399 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 C1orf87Q8N0U7 546 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 C1orf52Q8N6N3 182 aaKnown RBP3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 COX18Q8N8Q8 333 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 OR4Q3Q8NH05 313 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 RPS4Y2Q8TD47 263 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 CDS1Q92903 461 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 OVOL2Q9BRP0 275 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 IFT27Q9BW83 186 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 GIMAP4Q9NUV9 329 aa3.96□□□□□ -1.78
SBDSP1-204ENST00000453858 PPP1R14DQ9NXH3 145 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms