RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SMPD3Q9NY59 655 aaPredicted RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 UBAP1Q9NZ09 502 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 LAMP5Q9UJQ1 280 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 PTBP2Q9UKA9 531 aaKnown RBP3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 SNX6Q9UNH7 406 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 TMED5Q9Y3A6 229 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 ORC6Q9Y5N6 252 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR51B4Q9Y5P0 310 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 COL4A6Q14031 1691 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 SCN8AQ9UQD0 1980 aa3.07□□□□□ -1.92
HMGB3P6-201ENST00000444896 IGHV7-81A0A0B4J1V7 117 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 IGHV2-70DA0A0C4DH43 119 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 A0A1W2PNU3 283 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 GSAPA4D1B5 854 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 IQCF5A8MTL0 148 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 C9JVG2 144 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 PPIAL4DF5H284 164 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 H3BNH8 94 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SULT2B1O00204 365 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 MANBAO00462 879 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 GNGT2O14610 69 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CLOCKO15516 846 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 EMC8O43402 210 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 OBSL1O75147 1896 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 MYO1DO94832 1006 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 MFN2O95140 757 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SCELO95171 688 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CLDN9O95484 217 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 FTH1P02794 183 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 HEXBP07686 556 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CCL5P13501 91 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF30P17039 623 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CD70P32970 193 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ACAA2P42765 397 aaKnown RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 RPS9P46781 194 aaKnown RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 PRRC2AP48634 2157 aaKnown RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 AP1S2P56377 157 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 MTPNP58546 118 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CSTF1Q05048 431 aaKnown RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 MERTKQ12866 999 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 LTBP2Q14767 1821 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CHRNA6Q15825 494 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CARD16Q5EG05 197 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 PAGE3Q5JUK9 113 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 GPRC6AQ5T6X5 926 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 LRRC66Q68CR7 880 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 GLYATQ6IB77 296 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 PYHIN1Q6K0P9 492 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 NANOGP8Q6NSW7 305 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 TTC33Q6PID6 262 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SCIMPQ6UWF3 145 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 C16orf62Q7Z3J2 963 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 TMEM150AQ86TG1 271 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 BBS7Q8IWZ6 715 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF786Q8N393 782 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SVOPLQ8N434 492 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 LIX1Q8N485 282 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CBR4Q8N4T8 237 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 DHRSXQ8N5I4 330 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF555Q8NEP9 628 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR51G2Q8NGK0 314 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR5L2Q8NGL0 311 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR6K2Q8NGY2 324 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 PNPT1Q8TCS8 783 aaKnown RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 WFDC5Q8TCV5 224 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 LKAAEAR1Q8TD35 194 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 MCOLN3Q8TDD5 553 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 C7orf33Q8WU49 177 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SPRYD4Q8WW59 207 aaPredicted RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CYGBQ8WWM9 190 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SLC5A11Q8WWX8 675 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ELMO1Q92556 727 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 MARC2Q969Z3 335 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ECHDC3Q96DC8 303 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 NRBF2Q96F24 287 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CMTM7Q96FZ5 175 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ITCHQ96J02 903 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 CYYR1Q96J86 154 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 IMMP1LQ96LU5 166 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 RNF145Q96MT1 663 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 FOPNLQ96NB1 174 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SMIM14Q96QK8 99 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 TXN2Q99757 166 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 NICN1Q9BSH3 213 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ING2Q9H160 280 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 OR51J1Q9H342 316 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 NANOGQ9H9S0 305 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 PARVBQ9HBI1 364 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 IL26Q9NPH9 171 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SMOXQ9NWM0 555 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 C1orf109Q9NX04 203 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 SIGLEC8Q9NYZ4 499 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 GNG12Q9UBI6 72 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 RSL24D1Q9UHA3 163 aaKnown RBP3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 PRO0461Q9UI25 63 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 ZNF225Q9UK10 706 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 TBX21Q9UL17 535 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 BLOC1S6Q9UL45 172 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 HS3ST2Q9Y278 367 aa3.06□□□□□ -1.92
HMGB3P6-201ENST00000444896 PPIL1Q9Y3C6 166 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms