RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 NDUFAF3Q9BU61 184 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 M0R1X1 148 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 ABLIM3O94929 683 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 ZNF154Q13106 437 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 ACKR1Q16570 336 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 TMEM268Q5VZI3 342 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 TMEM91Q6ZNR0 172 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 OR5D18Q8NGL1 313 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 SMIM12Q96EX1 92 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 MOGAT1Q96PD6 335 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 MS4A8Q9BY19 250 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 NMES1Q9C002 83 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 NXF5Q9H1B4 397 aaKnown RBP9.38□□□□□ -0.91
LIN54-202ENST00000442461 KLRF1Q9NZS2 232 aa9.38□□□□□ -0.91
LIN54-202ENST00000442461 NXT1Q9UKK6 140 aaKnown RBP9.38□□□□□ -0.91
LIN54-202ENST00000442461 LSM2Q9Y333 95 aaKnown RBP9.38□□□□□ -0.91
LIN54-202ENST00000442461 MED1Q15648 1581 aaPredicted RBP9.38□□□□□ -0.91
LIN54-202ENST00000442461 F5H5K5 113 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 SFT2D2O95562 160 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 FGF19O95750 216 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 HOXB9P17482 250 aaPredicted RBP9.37□□□□□ -0.91
LIN54-202ENST00000442461 ERVS71-1P61550 626 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 BSXQ3C1V8 233 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 TMPRSS11FQ6ZWK6 438 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 RGP1Q92546 391 aaPredicted RBP9.37□□□□□ -0.91
LIN54-202ENST00000442461 SFXN1Q9H9B4 322 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.37□□□□□ -0.91
LIN54-202ENST00000442461 ACAD8Q9UKU7 415 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 ABT1Q9ULW3 272 aaKnown RBP9.37□□□□□ -0.91
LIN54-202ENST00000442461 KDM3BQ7LBC6 1761 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 FMN2Q9NZ56 1722 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 DUXBA0A1W2PPF3 345 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 CTAG2O75638 210 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 OR2A4O95047 310 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 GSTP1P09211 210 aaKnown RBP9.37□□□□□ -0.91
LIN54-202ENST00000442461 ZNF888P0CJ79 500 aaPredicted RBP9.37□□□□□ -0.91
LIN54-202ENST00000442461 GABRA4P48169 554 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 SLC25A30Q5SVS4 291 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 GPR137CQ8N3F9 429 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 SLC16A11Q8NCK7 471 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 OR5AU1Q8NGC0 362 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 OR2A7Q96R45 310 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 SERINC2Q96SA4 455 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 BANF2Q9H503 90 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 PISDQ9UG56 409 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 LIPGQ9Y5X9 500 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 ZNF840PA6NDX5 716 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 HSPB2A8KAH6 182 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 CD99P14209 185 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 CRISP2P16562 243 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 CCNOP22674 350 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 SULT1A2P50226 295 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 WNT3P56703 355 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 HSPB2Q16082 182 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 OR2D3Q8NGH3 330 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 PAAF1Q9BRP4 392 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 OR10A5Q9H207 317 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 PLEKHF2Q9H8W4 249 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 KCNIP1Q9NZI2 227 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 NAGKQ9UJ70 344 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 FUT9Q9Y231 359 aa9.37□□□□□ -0.91
LIN54-202ENST00000442461 MED19A0JLT2 244 aaPredicted RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 MASP2O00187 686 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 UBE2CO00762 179 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 SMAD6O43541 496 aaKnown RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 SSSCA1O60232 199 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 DOK2O60496 412 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 FCMRO60667 390 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 RNGTTO60942 597 aaKnown RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 HOXA5P20719 270 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 CLDN2P57739 230 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 ZNF85Q03923 595 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 LANCL3Q6ZV70 420 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 LRP11Q86VZ4 500 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 GPR32P1Q8NGA4 272 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 OR51A2Q8NGJ7 313 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 RTN4IP1Q8WWV3 396 aaPredicted RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 NTNG1Q9Y2I2 539 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 LRRC37A3O60309 1634 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 VSTM2BA6NLU5 285 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 DVL1O14640 695 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 ZNF749O43361 778 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 OR7C1O76099 320 aaPredicted RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 PXNP49023 591 aaPredicted RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 ZNF157P51786 506 aaPredicted RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 PLCXD2Q0VAA5 305 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 IL22RA1Q8N6P7 574 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 VN1R17PQ8TDU5 208 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 MR1Q95460 341 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 SPTSSAQ969W0 71 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 MACROD1Q9BQ69 325 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 LAT2Q9GZY6 243 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 DNAJC4Q9NNZ3 241 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 CICQ96RK0 1608 aaPredicted RBP9.36□□□□□ -0.91
LIN54-202ENST00000442461 NWD2Q9ULI1 1742 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 LOC107986453A0A1B0GWG9 222 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 TMEM210A6NLX4 147 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 B4E171 279 aa9.36□□□□□ -0.91
LIN54-202ENST00000442461 NDUFS8O00217 210 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms