RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TAAR3PQ9P1P4 343 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 N6AMT1Q9Y5N5 214 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 HSPE1-MOB4S4R3N1 261 aa16.46■□□□□ 0.23
HOXA9-202ENST00000396345 H7C417 338 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 PSMD9O00233 223 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 WBP4O75554 376 aaKnown RBP16.45■□□□□ 0.22
HOXA9-202ENST00000396345 IGHV3-13P01766 116 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 SLC2A1P11166 492 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 DBTP11182 482 aaKnown RBP16.45■□□□□ 0.22
HOXA9-202ENST00000396345 ALDH3B1P43353 468 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 PPOXP50336 477 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 ART1P52961 327 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 ROM1Q03395 351 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 MALLQ13021 153 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 MOGQ16653 247 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 NKPD1Q17RQ9 610 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 C6orf52Q5T4I8 152 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 LRRC75A-AS1Q8N1F1 130 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 RFLNBQ8N5W9 214 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 CNIH3Q8TBE1 160 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 CMBLQ96DG6 245 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 LGALS12Q96DT0 336 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 OR8B4Q96RC9 309 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 FOXC2Q99958 501 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 NIPAL2Q9H841 368 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 SP140LQ9H930 580 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 AMBNQ9NP70 447 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 GPR160Q9UJ42 338 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 IKZF2Q9UKS7 526 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 RPL36Q9Y3U8 105 aaKnown RBP16.45■□□□□ 0.22
HOXA9-202ENST00000396345 LRP12Q9Y561 859 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 CREBBPQ92793 2442 aa16.45■□□□□ 0.22
HOXA9-202ENST00000396345 A0A1W2PQL4 384 aaPredicted RBP16.44■□□□□ 0.22
HOXA9-202ENST00000396345 PRR32B1ATL7 298 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 M0R233 179 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 ZNF254O75437 659 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 ANXA2P07355 339 aaKnown RBP16.44■□□□□ 0.22
HOXA9-202ENST00000396345 ADRA2AP08913 450 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 ATP5J2P56134 94 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 ZNF121P58317 390 aaPredicted RBP16.44■□□□□ 0.22
HOXA9-202ENST00000396345 EGR3Q06889 387 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 PSG7Q13046 419 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 HLXQ14774 488 aaPredicted RBP16.44■□□□□ 0.22
HOXA9-202ENST00000396345 SMN1Q16637 294 aaKnown RBP16.44■□□□□ 0.22
HOXA9-202ENST00000396345 SNAI3Q3KNW1 292 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 ALKBH6Q3KRA9 238 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 IZUMO2Q6UXV1 221 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 FBXW12Q6X9E4 464 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 USP51Q70EK9 711 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 ZNF679Q8IYX0 411 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 VRK1Q99986 396 aaPredicted RBP16.44■□□□□ 0.22
HOXA9-202ENST00000396345 EXOGQ9Y2C4 368 aaKnown RBP16.44■□□□□ 0.22
HOXA9-202ENST00000396345 PCDHGB1Q9Y5G3 927 aa16.44■□□□□ 0.22
HOXA9-202ENST00000396345 J3QRE1 110 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 RAC2P15153 192 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 VHLP40337 213 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 RIDAP52758 137 aaKnown RBP16.43■□□□□ 0.22
HOXA9-202ENST00000396345 TMEM255AQ5JRV8 349 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 FAM57BQ71RH2 274 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 SSX6Q7RTT6 188 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 THAP5Q7Z6K1 395 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 SNX33Q8WV41 574 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 HAVCR1Q96D42 359 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 MS4A5Q9H3V2 200 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 BRD7Q9NPI1 651 aa16.43■□□□□ 0.22
HOXA9-202ENST00000396345 MAP1AP78559 2803 aaPredicted RBP16.43■□□□□ 0.22
HOXA9-202ENST00000396345 C5orf63A6NC05 138 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 MAGEB4O15481 346 aaPredicted RBP16.42■□□□□ 0.22
HOXA9-202ENST00000396345 TBX1O43435 398 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 TIMM8AO60220 97 aaPredicted RBP16.42■□□□□ 0.22
HOXA9-202ENST00000396345 KITLGP21583 273 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 HSPA13P48723 471 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 PSMA6P60900 246 aaKnown RBP16.42■□□□□ 0.22
HOXA9-202ENST00000396345 ACTC1P68032 377 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 ACTA1P68133 377 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 RAB40BQ12829 278 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 CDK5R2Q13319 367 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 KLHL22Q53GT1 634 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 ZCCHC24Q8N2G6 241 aaKnown RBP16.42■□□□□ 0.22
HOXA9-202ENST00000396345 PGAM5Q96HS1 289 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 RAB1BQ9H0U4 201 aa16.42■□□□□ 0.22
HOXA9-202ENST00000396345 MRPS18AQ9NVS2 196 aaKnown RBP16.42■□□□□ 0.22
HOXA9-202ENST00000396345 PURGQ9UJV8 347 aaKnown RBP16.42■□□□□ 0.22
HOXA9-202ENST00000396345 DAPL1A0PJW8 107 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 NDUFS7O75251 213 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 FADS2O95864 444 aaKnown RBP16.41■□□□□ 0.22
HOXA9-202ENST00000396345 IGHV4-39P01824 125 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 MT-ND5P03915 603 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 KRT8P05787 483 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 NAT2P11245 290 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 ANOS1P23352 680 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 DCTDP32321 178 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 ZNF85Q03923 595 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 GK2Q14410 553 aaPredicted RBP16.41■□□□□ 0.22
HOXA9-202ENST00000396345 GLYATL3Q5SZD4 288 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 OR2T2Q6IF00 324 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 PGAP1Q75T13 922 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 PRSS45Q7RTY3 260 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 ACBD7Q8N6N7 88 aa16.41■□□□□ 0.22
HOXA9-202ENST00000396345 OR52H1Q8NGJ2 320 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms