RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 CFHR2P36980 270 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 OMPP47874 163 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 CENPAP49450 140 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 RAD23AP54725 363 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 LIPEQ05469 1076 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 DGCR6Q14129 220 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 MPPED2Q15777 294 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 PRAMEF6Q5VXH4 476 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 CGB2Q6NT52 195 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 PGM2L1Q6PCE3 622 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 BRICD5Q6PL45 260 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 CFAP77Q6ZQR2 320 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 RHOUQ7L0Q8 258 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 TMEM86BQ8N661 226 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 ERGIC1Q969X5 290 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 RSRC1Q96IZ7 334 aaKnown RBP11.45□□□□□ -0.58
CXCL12-202ENST00000374426 TBX15Q96SF7 602 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 PCGF1Q9BSM1 259 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 UFSP2Q9NUQ7 469 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 CTSZQ9UBR2 303 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 ENPP4Q9Y6X5 453 aa11.45□□□□□ -0.58
CXCL12-202ENST00000374426 CENPVL3A0A0U1RRI6 287 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 NME4O00746 187 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 PPP1R3DO95685 299 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 H1F0P07305 194 aaKnown RBP11.44□□□□□ -0.58
CXCL12-202ENST00000374426 TROVE2P10155 538 aaKnown RBP eCLIP11.44□□□□□ -0.58
CXCL12-202ENST00000374426 CRABP1P29762 137 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 CD200P41217 278 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 KRTAP10-3P60369 221 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 DPY19L2P2Q6ZN68 376 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 ARPINQ7Z6K5 226 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 NAA40Q86UY6 237 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 CYP4Z1Q86W10 505 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 OR6V1Q8N148 313 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 SLC26A10Q8NG04 563 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 OR11L1Q8NGX0 322 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 FAM71F1Q96KD3 344 aaPredicted RBP11.44□□□□□ -0.58
CXCL12-202ENST00000374426 TECTBQ96PL2 329 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 CCT8L2Q96SF2 557 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 FGFR1OP2Q9NVK5 253 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 ARMCX1Q9P291 453 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 AP3M1Q9Y2T2 418 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 CAPN7Q9Y6W3 813 aa11.44□□□□□ -0.58
CXCL12-202ENST00000374426 TRBV4-1A0A0J9YWV2 114 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 ZNF879B4DU55 563 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 F5H5K5 113 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 P2RY10O00398 339 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 GSTA4O15217 222 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 TOX4O94842 621 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 MDH1P40925 334 aaKnown RBP11.43□□□□□ -0.58
CXCL12-202ENST00000374426 NPY4RP50391 375 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 RPS6KA3P51812 740 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 SEC23BQ15437 767 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 FGD3Q5JSP0 725 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 SLC18B1Q6NT16 456 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 DNM1P34Q6PK57 102 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 ZNF620Q6ZNG0 422 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 LINC00346Q8IVM7 164 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 SSMEM1Q8WWF3 244 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 SLCO4A1Q96BD0 722 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 PITX2Q99697 317 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 MMP27Q9H306 513 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 MMADHCQ9H3L0 296 aaPredicted RBP11.43□□□□□ -0.58
CXCL12-202ENST00000374426 SMURF1Q9HCE7 757 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 SRA1Q9HD15 236 aaKnown RBP11.43□□□□□ -0.58
CXCL12-202ENST00000374426 PNRC2Q9NPJ4 139 aaKnown RBP11.43□□□□□ -0.58
CXCL12-202ENST00000374426 NDUFAF4Q9P032 175 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 B9D1Q9UPM9 204 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 POMT1Q9Y6A1 747 aa11.43□□□□□ -0.58
CXCL12-202ENST00000374426 UNC119BA6NIH7 251 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 M0QZ24 198 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 PTBP3O95758 552 aaKnown RBP11.42□□□□□ -0.58
CXCL12-202ENST00000374426 LIPFP07098 398 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 CA6P23280 308 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 GSK3BP49841 420 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 SLC7A2P52569 658 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 TRAP1Q12931 704 aaKnown RBP11.42□□□□□ -0.58
CXCL12-202ENST00000374426 ECH1Q13011 328 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 CD276Q5ZPR3 534 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 SFRP4Q6FHJ7 346 aaPredicted RBP11.42□□□□□ -0.58
CXCL12-202ENST00000374426 ASPHD2Q6ICH7 369 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 SMARCD3Q6STE5 483 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 PGAP1Q75T13 922 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 SPRYD4Q8WW59 207 aaPredicted RBP11.42□□□□□ -0.58
CXCL12-202ENST00000374426 GATAD2BQ8WXI9 593 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 WDFY2Q96P53 400 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 ERMAPQ96PL5 475 aaPredicted RBP11.42□□□□□ -0.58
CXCL12-202ENST00000374426 NMNAT3Q96T66 252 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 ATF6BQ99941 703 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 ACOXLQ9NUZ1 547 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 KIF17Q9P2E2 1029 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 ERVK-18Q9QC07 812 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 RNF7Q9UBF6 113 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 CYB5R1Q9UHQ9 305 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 AURKCQ9UQB9 309 aa11.42□□□□□ -0.58
CXCL12-202ENST00000374426 CD300LBA8K4G0 201 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 C3orf80F5H4A9 247 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 LGALS8O00214 317 aa11.41□□□□□ -0.58
CXCL12-202ENST00000374426 TIMM23O14925 209 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms