RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 NELFAQ9H3P2 528 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 PROK2Q9HC23 129 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 UPB1Q9UBR1 384 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 FBLN5Q9UBX5 448 aa12.42□□□□□ -0.42
USF1-202ENST00000368020 TEX51A0A1B0GUA7 166 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 ZIC3O60481 467 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 CREBL2O60519 120 aaPredicted RBP12.41□□□□□ -0.42
USF1-202ENST00000368020 ICMTO60725 284 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 ALDOBP05062 364 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 SERPINA7P05543 415 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 TCN2P20062 427 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 GNALP38405 381 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 EIF1AXP47813 144 aaKnown RBP12.41□□□□□ -0.42
USF1-202ENST00000368020 CAMK2BQ13554 666 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 RTP5Q14D33 572 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 CARD17Q5XLA6 110 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 ZNF529Q6P280 563 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 GLDNQ6ZMI3 551 aaPredicted RBP12.41□□□□□ -0.42
USF1-202ENST00000368020 CFAP77Q6ZQR2 320 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 SPICQ8N5J4 248 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 GJC3Q8NFK1 279 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 OR1M1Q8NGA1 313 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 OR6N1Q8NGY5 312 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 GPX8Q8TED1 209 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 GNRHR2Q96P88 292 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 FOXJ2Q9P0K8 574 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 SCP2D1Q9UJQ7 156 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 FARSAQ9Y285 508 aaKnown RBP12.41□□□□□ -0.42
USF1-202ENST00000368020 NPTNQ9Y639 398 aa12.41□□□□□ -0.42
USF1-202ENST00000368020 ZNF814B7Z6K7 855 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 STMND1H3BQB6 276 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 LINC01387J3KSC0 135 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 FABP7O15540 132 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 CCL1P22362 96 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 VEGFCP49767 419 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 ZNF84P51523 738 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 EFNB2P52799 333 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 SUCLG1P53597 346 aaKnown RBP12.4□□□□□ -0.42
USF1-202ENST00000368020 RAC3P60763 192 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 SPOCK1Q08629 439 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 CCDC92Q53HC0 331 aaPredicted RBP12.4□□□□□ -0.42
USF1-202ENST00000368020 JMJD6Q6NYC1 403 aaPredicted RBP12.4□□□□□ -0.42
USF1-202ENST00000368020 ZNF767PQ75MW2 155 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 DOK3Q7L591 496 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 TIPARPQ7Z3E1 657 aaKnown RBP12.4□□□□□ -0.42
USF1-202ENST00000368020 LYPD6Q86Y78 171 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 TMEM229BQ8NBD8 167 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 OR9K2Q8NGE7 335 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 FGGYQ96C11 551 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 RADILQ96JH8 1075 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 JSRP1Q96MG2 331 aaPredicted RBP12.4□□□□□ -0.42
USF1-202ENST00000368020 NKIRAS2Q9NYR9 191 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 MRPL15Q9P015 296 aaKnown RBP12.4□□□□□ -0.42
USF1-202ENST00000368020 ASH2LQ9UBL3 628 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 SLC5A6Q9Y289 635 aa12.4□□□□□ -0.42
USF1-202ENST00000368020 MRPS18BQ9Y676 258 aaKnown RBP12.4□□□□□ -0.42
USF1-202ENST00000368020 UBE2QL1A1L167 161 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 ARPC1BO15143 372 aaKnown RBP12.4□□□□□ -0.43
USF1-202ENST00000368020 OPN1LWP04000 364 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 MELTFP08582 738 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 GTF2F2P13984 249 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 C4BPBP20851 252 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 OTX2P32243 289 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 FOXK1P85037 733 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 LINC00303Q3SY05 128 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 MEIOBQ8N635 442 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 OR51A2Q8NGJ7 313 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 CT55Q8WUE5 264 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 ASB13Q8WXK3 278 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 GPR87Q9BY21 358 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 OR10A4Q9H209 315 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 ASCL3Q9NQ33 180 aa12.4□□□□□ -0.43
USF1-202ENST00000368020 C21orf140B9A014 251 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 DOK2O60496 412 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 CYB5AP00167 134 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 CX3CR1P49238 355 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 ZMYND11Q15326 602 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 ACER2Q5QJU3 275 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 ZNF627Q7L945 461 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 OR2W3Q7Z3T1 314 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 BEST3Q8N1M1 668 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 CLEC1AQ8NC01 280 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 OR4C16Q8NGL9 310 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 OR1J2Q8NGS2 313 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 ZNF431Q8TF32 576 aaPredicted RBP12.39□□□□□ -0.43
USF1-202ENST00000368020 FAM46BQ96A09 425 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 C10orf35Q96D05 121 aa12.39□□□□□ -0.43
USF1-202ENST00000368020 SLC25A21Q9BQT8 299 aaPredicted RBP12.39□□□□□ -0.43
USF1-202ENST00000368020 ZNF436Q9C0F3 470 aaPredicted RBP12.39□□□□□ -0.43
USF1-202ENST00000368020 PNRC2Q9NPJ4 139 aaKnown RBP12.39□□□□□ -0.43
USF1-202ENST00000368020 CGGBP1Q9UFW8 167 aaPredicted RBP12.39□□□□□ -0.43
USF1-202ENST00000368020 ZNF780AO75290 641 aaPredicted RBP12.38□□□□□ -0.43
USF1-202ENST00000368020 KDM4BO94953 1096 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 UBBP0CG47 229 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 CDAP32320 146 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 CYB561P49447 251 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 ZNF121P58317 390 aaPredicted RBP12.38□□□□□ -0.43
USF1-202ENST00000368020 GALK2Q01415 458 aa12.38□□□□□ -0.43
USF1-202ENST00000368020 PMPCAQ10713 525 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms