RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 A0A1W2PRD5 423 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 A0A1W2PRF3 423 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 A0A1W2PRM7 423 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 FCN1O00602 326 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 M6PRP20645 277 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 THBS4P35443 961 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TUBA3CQ13748 450 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 GK2Q14410 553 aaPredicted RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 UNC50Q53HI1 259 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 PIP5KL1Q5T9C9 394 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TUBA3EQ6PEY2 450 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ZNF620Q6ZNG0 422 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TUBA1AQ71U36 451 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 REC114Q7Z4M0 266 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 PPP1R32Q7Z5V6 425 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 LYG2Q86SG7 212 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ZDHHC21Q8IVQ6 265 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 WDTC1Q8N5D0 677 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR8U1Q8NH10 309 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 KCNG3Q8TAE7 436 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 HPSE2Q8WWQ2 592 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 COX14Q96I36 57 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 CIB3Q96Q77 187 aaPredicted RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR14A2Q96R54 314 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MED29Q9NX70 200 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 VSX1Q9NZR4 365 aaPredicted RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 A0A096LPE4 126 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 IGHV1-69-2A0A0G2JMI3 117 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 A0A1W2PPZ6 126 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 DHRS12A0PJE2 317 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ZFP92A6NM28 416 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TMPRSS2O15393 492 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 DAOP14920 347 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 S100A1P23297 94 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 GRPRP30550 384 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 PRKAR1BP31321 381 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MMDQ15546 238 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ECSCRQ19T08 205 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ANKRD22Q5VYY1 191 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR2T5Q6IEZ7 315 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ZNF782Q6ZMW2 699 aaPredicted RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 SH2D5Q6ZV89 423 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 IGFN1Q86VF2 1251 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 PRSS33Q8NF86 280 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR10J6PQ8NGY7 276 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR2T29Q8NH02 315 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MRAPQ8TCY5 172 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MYEOVQ96EZ4 313 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 NSUN5Q96P11 429 aaKnown RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 LRRC3Q9BY71 257 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TPK1Q9H3S4 243 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 RNF167Q9H6Y7 350 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 AKIRIN1Q9H9L7 192 aaPredicted RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 DMRT3Q9NQL9 472 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 C1orf123Q9NWV4 160 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 CDC42BPBQ9Y5S2 1711 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 C4AP0C0L4 1744 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 LOC100506127A0A0U1RQW1 187 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MYOCOSA0A1B0GUC4 107 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 PITX3O75364 302 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR10J4P0C629 311 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 SLURP2P0DP57 97 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 BGNP21810 368 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 AADACP22760 399 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MYF6P23409 242 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 CCR9P51686 369 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 S100A10P60903 97 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ZP4Q12836 540 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 SPATS1Q496A3 300 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ACSM6Q6P461 480 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 SBSNQ6UWP8 590 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 WDR88Q6ZMY6 472 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 LHFPL2Q6ZUX7 228 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 NCCRP1Q6ZVX7 275 aaPredicted RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 DEFB107AQ8IZN7 70 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 GPR26Q8NDV2 337 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR7G3Q8NG95 312 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR5K1Q8NHB7 308 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TMEM239Q8WW34 195 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 SLC41A3Q96GZ6 507 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 FAM84AQ96KN4 292 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 C19orf43Q9BQ61 176 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 ABHD6Q9BV23 337 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MBNL1Q9NR56 388 aaKnown RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 SMOXQ9NWM0 555 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 KAT6AQ92794 2004 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TTC28Q96AY4 2481 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 NBASA2RRP1 2371 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR2A25A4D2G3 310 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 SPRY1O43609 319 aaPredicted RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 CYTIPO60759 359 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TOX4O94842 621 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 OR8U8P0C7N1 319 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MAGEA5P43359 124 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 CTSCP53634 463 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 FXYD6P3P58550 94 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 MCCD1P59942 119 aaPredicted RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 SMN1Q16637 294 aaKnown RBP3.66□□□□□ -1.82
USH2A-202ENST00000366942 PYDC2Q56P42 97 aa3.66□□□□□ -1.82
USH2A-202ENST00000366942 TIMM23BQ5SRD1 257 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms