RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 ANKRD34BA5PLL1 514 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 ENSAO43768 121 aaKnown RBP4.39□□□□□ -1.71
SCN3A-202ENST00000360093 GUSBP08236 651 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 ADH4P08319 380 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 OR8U8P0C7N1 319 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 PCBP3P57721 371 aaKnown RBP4.39□□□□□ -1.71
SCN3A-202ENST00000360093 GSG1Q2KHT4 349 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 RGS7BPQ6MZT1 257 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-202ENST00000360093 LYSMD2Q8IV50 215 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 TMEM99Q8N816 258 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 ST7LQ8TDW4 575 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 RNF141Q8WVD5 230 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 POFUT1Q9H488 388 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 METTL17Q9H7H0 456 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-202ENST00000360093 FN3KRPQ9HA64 309 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 GALNT9Q9HCQ5 603 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 DLL4Q9NR61 685 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 LIN7CQ9NUP9 197 aaKnown RBP4.39□□□□□ -1.71
SCN3A-202ENST00000360093 SSUH2Q9Y2M2 353 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 A0A1B0GTL3 188 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 A6NIN4 97 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 LY86O95711 162 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 ACTL6AO96019 429 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 IGHV3-9P01782 118 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 SPEM2Q0P670 501 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 NKG7Q16617 165 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 H2BFWTQ7Z2G1 175 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 OR10G3Q8NGC4 313 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 OR1F12Q8NHA8 337 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 DAZAP1Q96EP5 407 aaKnown RBP4.39□□□□□ -1.71
SCN3A-202ENST00000360093 FOXB1Q99853 325 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 TRAPPC4Q9Y296 219 aa4.39□□□□□ -1.71
SCN3A-202ENST00000360093 PTPRZ1P23471 2315 aaPredicted RBP4.39□□□□□ -1.71
SCN3A-202ENST00000360093 DNPH1O43598 174 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 AQP8O94778 261 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 IFI6P09912 130 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 ZNF121P58317 390 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 CDK5Q00535 292 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 RAB35Q15286 201 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 KCNIP4Q6PIL6 250 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 OGFOD3Q6PK18 319 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 OR4D6Q8NGJ1 314 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 S100PBPQ96BU1 408 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 S1PR3Q99500 378 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 RAB33BQ9H082 229 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 GCM1Q9NP62 436 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 ZNF236Q9UL36 1845 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 CABIN1Q9Y6J0 2220 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 HS3ST1O14792 307 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 APEX1P27695 318 aaKnown RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 PTPN6P29350 595 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 IDH3GP51553 393 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 UBE2IP63279 158 aaKnown RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 DHODHQ02127 395 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 PLA1AQ53H76 456 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 FAM74A1Q5RGS3 127 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 SLC51BQ86UW2 128 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 SLC35G3Q8N808 338 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 OR8B4Q96RC9 309 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 SF3B5Q9BWJ5 86 aaKnown RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 GPR173Q9NS66 373 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 MED29Q9NX70 200 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 KIAA1456Q9P272 454 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 RNF150Q9ULK6 438 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 SLCO1B1Q9Y6L6 691 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 RAB19A4D1S5 217 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 NUDT19A8MXV4 375 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 C1orf196B1AJZ1 125 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 BOLA2-SMG1P6H3BVE0 249 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 XRCC3O43542 346 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 SLC2A10O95528 541 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 CLDN1O95832 211 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 TGM6O95932 706 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 SMIM18P0DKX4 95 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 MMP15P51511 669 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 RAC3P60763 192 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 SNRPD2P62316 118 aaKnown RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 STAC2Q6ZMT1 411 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 FAM109AQ8N4B1 249 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 RBMXL3Q8N7X1 1067 aaKnown RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 LFNGQ8NES3 379 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 ZC3HAV1LQ96H79 300 aaKnown RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 CHST6Q9GZX3 395 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 HAO2Q9NYQ3 351 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 RP1L1Q8IWN7 2480 aaPredicted RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 B4E171 279 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 M0R1B8 84 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 ADRA2CP18825 462 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 ATF1P18846 271 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 TSPAN7P41732 249 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 EVX1P49640 407 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 PPT1P50897 306 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 GP2P55259 537 aaKnown RBP4.38□□□□□ -1.71
SCN3A-202ENST00000360093 HNF4GQ14541 408 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 C2orf76Q3KRA6 126 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 TRAT1Q6PIZ9 186 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 DHRS13Q6UX07 377 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 SMIM15Q7Z3B0 74 aa4.38□□□□□ -1.71
SCN3A-202ENST00000360093 VN1R4Q7Z5H5 301 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms