RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 TBX15Q96SF7 602 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 WNT5BQ9H1J7 359 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 POFUT1Q9H488 388 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 ABCD2Q9UBJ2 740 aa13.13□□□□□ -0.31
DDX55-202ENST00000354291 IGHV1-69DA0A0B4J2H0 117 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 A0A1W2PRQ8 180 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 ZNF879B4DU55 563 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 IFNL4K9M1U5 179 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 ICMTO60725 284 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 IGHV1-69P01742 117 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 GPR4P46093 362 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 PSME3P61289 254 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 DGCR6Q14129 220 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 SLC35E4Q6ICL7 350 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 SLC7A13Q8TCU3 470 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 WWC2-AS2Q96NR7 200 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 ELAC2Q9BQ52 826 aaKnown RBP13.12□□□□□ -0.31
DDX55-202ENST00000354291 TOR3AQ9H497 397 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 SPAG4Q9NPE6 437 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 NDRG4Q9ULP0 352 aaKnown RBP13.12□□□□□ -0.31
DDX55-202ENST00000354291 FAM96BQ9Y3D0 163 aa13.12□□□□□ -0.31
DDX55-202ENST00000354291 ATP8B1O43520 1251 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 XPNPEP2O43895 674 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 ABHD16AO95870 558 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 H1F0P07305 194 aaKnown RBP13.11□□□□□ -0.31
DDX55-202ENST00000354291 COX5BP10606 129 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 NCK1P16333 377 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 RHCEP18577 417 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 TUBG1P23258 451 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 PRDX6P30041 224 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 ENDOGQ14249 297 aaKnown RBP13.11□□□□□ -0.31
DDX55-202ENST00000354291 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 DEFB121Q5J5C9 76 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 GLYATQ6IB77 296 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 TSEN54Q7Z6J9 526 aaKnown RBP13.11□□□□□ -0.31
DDX55-202ENST00000354291 LDLRAD3Q86YD5 345 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 OR5AS1Q8N127 324 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 ZNF570Q96NI8 536 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 WDFY2Q96P53 400 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 TECTBQ96PL2 329 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 MYLK2Q9H1R3 596 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 KRCC1Q9NPI7 259 aaPredicted RBP13.11□□□□□ -0.31
DDX55-202ENST00000354291 POLE4Q9NR33 117 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 TUBG2Q9NRH3 451 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 DCAF13Q9NV06 445 aaKnown RBP13.11□□□□□ -0.31
DDX55-202ENST00000354291 SAMD4AQ9UPU9 718 aaKnown RBP13.11□□□□□ -0.31
DDX55-202ENST00000354291 SIGLEC9Q9Y336 463 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 ADAM18Q9Y3Q7 739 aa13.11□□□□□ -0.31
DDX55-202ENST00000354291 BIRC6Q9NR09 4857 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 PRSS37A4D1T9 235 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 BTBD17A6NE02 478 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 ANKRD61A6NGH8 418 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 H7C1C5 153 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 PHYHO14832 338 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 PTP4A3O75365 173 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 NDUFB2O95178 105 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 MMP9P14780 707 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 KITLGP21583 273 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 GABRA5P31644 462 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 TGFBR2P37173 567 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 LCN6P62502 163 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 SCRN3Q0VDG4 424 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 METTL11BQ5VVY1 283 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 GPR139Q6DWJ6 353 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 FAM122BQ7Z309 247 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 MOGAT3Q86VF5 341 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 LYG1Q8N1E2 194 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 PHF21AQ96BD5 680 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 FAM46AQ96IP4 442 aaKnown RBP13.1□□□□□ -0.31
DDX55-202ENST00000354291 Q96M85 177 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 ADA2Q9NZK5 511 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 NDUFAF4Q9P032 175 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 FOXJ3Q9UPW0 622 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 SIGLEC7Q9Y286 467 aa13.1□□□□□ -0.31
DDX55-202ENST00000354291 EPPK1P58107 5090 aaKnown RBP13.1□□□□□ -0.31
DDX55-202ENST00000354291 TEX13CA0A0J9YWL9 993 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 SCG5P05408 212 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 LIPFP07098 398 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 ZNF26P17031 533 aaPredicted RBP13.09□□□□□ -0.31
DDX55-202ENST00000354291 SDHAP31040 664 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 KRT72Q14CN4 511 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 MESTQ5EB52 335 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 FGD3Q5JSP0 725 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 FOXB2Q5VYV0 432 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 CD276Q5ZPR3 534 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 ZNF841Q6ZN19 808 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 GALNT4Q8N4A0 578 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 C19orf18Q8NEA5 215 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 OR10AD1Q8NGE0 317 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 MEGF10Q96KG7 1140 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 C7orf34Q96L11 122 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 EMC7Q9NPA0 242 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 NRIP3Q9NQ35 241 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 TBCCD1Q9NVR7 557 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 AURKCQ9UQB9 309 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 STARD10Q9Y365 291 aa13.09□□□□□ -0.31
DDX55-202ENST00000354291 SGCEO43556 437 aa13.08□□□□□ -0.32
DDX55-202ENST00000354291 KHDRBS3O75525 346 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms