RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 Q6ZN92 141 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 YRDCQ86U90 279 aaKnown RBP11.03□□□□□ -0.64
PCF11-201ENST00000298281 DOK5Q9P104 306 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 CHRM2P08172 466 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 NPY4RP50391 375 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 KCNRGQ8N5I3 272 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 NEURL3Q96EH8 262 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 ST8SIA5O15466 376 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 KLK10O43240 276 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 ALPLP05186 524 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 HTR1FP30939 366 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 PAFAH1B2P68402 229 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 ZNF239Q16600 458 aaKnown RBP11.02□□□□□ -0.64
PCF11-201ENST00000298281 TMEM116Q8NCL8 245 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 LFNGQ8NES3 379 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 OR10P1Q8NGE3 313 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 OR5M8Q8NGP6 311 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 OR2I1PQ8NGU4 316 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 ERGIC1Q969X5 290 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 SARGQ9BW04 601 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 HCFC2Q9Y5Z7 792 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.64
PCF11-201ENST00000298281 TRABD2BA6NFA1 517 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 CTXN2P0C2S0 81 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 H2AFB1P0C5Y9 115 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 OR8G3PP0DMU2 310 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 HOXD9P28356 352 aaPredicted RBP11.02□□□□□ -0.64
PCF11-201ENST00000298281 HOXC5Q00444 222 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 PXT1Q8NFP0 134 aa11.02□□□□□ -0.64
PCF11-201ENST00000298281 FIGNL2A6NMB9 653 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 H7C1C5 153 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 SCG5P05408 212 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 PMCHP20382 165 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 CD82P27701 267 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 LCN6P62502 163 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 NAXDQ8IW45 347 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 OR6M1Q8NGM8 313 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 A4GALTQ9NPC4 353 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 RBFOX1Q9NWB1 397 aaKnown RBP11.02□□□□□ -0.65
PCF11-201ENST00000298281 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 FAM53CQ9NYF3 392 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 FBXL17Q9UF56 701 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 KIR2DS1A0A191URI9 304 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 FAM90A27PA6NNH2 459 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 UTS2O95399 124 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 CRYAAP02489 173 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 AKR1C3P42330 323 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 KIR2DS4P43632 304 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 KIR2DS1Q14954 304 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 AMMECR1LQ6DCA0 310 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 ZNF620Q6ZNG0 422 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 WFDC3Q8IUB2 231 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 PRSS35Q8N3Z0 413 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 FBXO17Q96EF6 278 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 INSM2Q96T92 566 aaPredicted RBP11.02□□□□□ -0.65
PCF11-201ENST00000298281 PLA2G12AQ9BZM1 189 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.65
PCF11-201ENST00000298281 TMED7-TICAM2A0A0A6YYA0 188 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 P2RY10O00398 339 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 PPP1CCP36873 323 aaKnown RBP11.02□□□□□ -0.65
PCF11-201ENST00000298281 RNASEKQ6P5S7 137 aaKnown RBP11.02□□□□□ -0.65
PCF11-201ENST00000298281 CLEC14AQ86T13 490 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 DNAJC5GQ8N7S2 189 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 SLC22A12Q96S37 553 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 CACFD1Q9UGQ2 172 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 NDRG4Q9ULP0 352 aaKnown RBP11.02□□□□□ -0.65
PCF11-201ENST00000298281 TMED7Q9Y3B3 224 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 ARFGEF3Q5TH69 2177 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 TMEM200CA6NKL6 621 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 SPRY3O43610 288 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 CTNSO60931 367 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 C1SP09871 688 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 GNG10P50151 68 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 REEP5Q00765 189 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 DHODHQ02127 395 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 ZNF85Q03923 595 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 LYPD4Q6UWN0 246 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 SLC7A5P1Q8MH63 180 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 GATA6Q92908 595 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 RNF2Q99496 336 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 MYO7BQ6PIF6 2116 aa11.02□□□□□ -0.65
PCF11-201ENST00000298281 SOX15O60248 233 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 CACNA1DQ01668 2161 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 KIAA0141Q14154 515 aaPredicted RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 RTP5Q14D33 572 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 GYPAP02724 150 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 CYC1P08574 325 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 EPXP11678 715 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 ETFDHQ16134 617 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 OR13D1Q8NGV5 346 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 OR10K1Q8NGX5 313 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 FAAP24Q9BTP7 215 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 GMPR2Q9P2T1 348 aaKnown RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 POLDIP2Q9Y2S7 368 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 HS3ST3A1Q9Y663 406 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 FURINP09958 794 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 EN2P19622 333 aaPredicted RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 CCKARP32238 428 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 PRR7Q8TB68 274 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 GHSRQ92847 366 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms