RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 CHST6Q9GZX3 395 aa22.26■■□□□ 1.15
ROM1-201ENST00000278833 CENPMQ9NSP4 180 aa22.26■■□□□ 1.15
ROM1-201ENST00000278833 U3KQA8 63 aa22.26■■□□□ 1.15
ROM1-201ENST00000278833 OTOGLQ3ZCN5 2332 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 EP300Q09472 2414 aaPredicted RBP22.25■■□□□ 1.15
ROM1-201ENST00000278833 ARID1BQ8NFD5 2236 aaPredicted RBP22.25■■□□□ 1.15
ROM1-201ENST00000278833 hCG_1807616A0A1W2PRN6 198 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 ZNF878C9JN71 531 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 I3L521 148 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 SYT7O43581 403 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 LY6G6FQ5SQ64 297 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 TMEM81Q6P7N7 255 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 OR2W3Q7Z3T1 314 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 BPIFB2Q8N4F0 458 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 PAQR4Q8N4S7 273 aaPredicted RBP22.25■■□□□ 1.15
ROM1-201ENST00000278833 OR13C8Q8NGS7 320 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 FGGYQ96C11 551 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 CACNA1CQ13936 2221 aa22.25■■□□□ 1.15
ROM1-201ENST00000278833 OR14I1A6ND48 311 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 WIPF3A6NGB9 483 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 CCL1P22362 96 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 UNC119Q13432 240 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 HIST3H3Q16695 136 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 TMEM65Q6PI78 240 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 OR5M8Q8NGP6 311 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 OR1J2Q8NGS2 313 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 OR6K3Q8NGY3 331 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 THAP3Q8WTV1 239 aaPredicted RBP22.24■■□□□ 1.15
ROM1-201ENST00000278833 MESP1Q9BRJ9 268 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 ATXN7L1Q9ULK2 861 aaPredicted RBP22.24■■□□□ 1.15
ROM1-201ENST00000278833 LHFPL6Q9Y693 200 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 RIF1Q5UIP0 2472 aaKnown RBP22.24■■□□□ 1.15
ROM1-201ENST00000278833 TMEM14DPA8MWL7 114 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 B8ZZF3 427 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 ARPC5O15511 151 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 SIX6O95475 246 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 FAHD2BQ6P2I3 314 aaPredicted RBP22.24■■□□□ 1.15
ROM1-201ENST00000278833 CORO6Q6QEF8 472 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 RFPL4BQ6ZWI9 263 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 GPAT4Q86UL3 456 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 OR5D14Q8NGL3 314 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 RBPMSQ93062 196 aaKnown RBP22.24■■□□□ 1.15
ROM1-201ENST00000278833 FAHD2AQ96GK7 314 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 ANAPC10Q9UM13 185 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 PLEKHA6Q9Y2H5 1048 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 HDGFL3Q9Y3E1 203 aa22.24■■□□□ 1.15
ROM1-201ENST00000278833 TNRC6BQ9UPQ9 1833 aaKnown RBP22.23■■□□□ 1.15
ROM1-201ENST00000278833 A0A1W2PQM1 296 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 PROB1E7EW31 1015 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 H3BML4 177 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 IL2RAP01589 272 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 RAB3AP20336 220 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 AGTR1P30556 359 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 EIF1P41567 113 aaKnown RBP22.23■■□□□ 1.15
ROM1-201ENST00000278833 FGL1Q08830 312 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 PMEPA1Q969W9 287 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 ADAT3Q96EY9 351 aaPredicted RBP22.23■■□□□ 1.15
ROM1-201ENST00000278833 LOXL4Q96JB6 756 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 OXGR1Q96P68 337 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 NKX3-1Q99801 234 aaPredicted RBP22.23■■□□□ 1.15
ROM1-201ENST00000278833 REG4Q9BYZ8 158 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 METTL7AQ9H8H3 244 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 PI4KAP42356 2102 aa22.23■■□□□ 1.15
ROM1-201ENST00000278833 IGHV5-10-1A0A0J9YXX1 117 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 TMEM235A6NFC5 223 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 M0QYG6 137 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 NMBP08949 121 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 CLRN1P58418 232 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 RGS7BPQ6MZT1 257 aaPredicted RBP22.22■■□□□ 1.15
ROM1-201ENST00000278833 GUSBP11Q6P575 273 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 GSG1LQ6UXU4 331 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 OR10G3Q8NGC4 313 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 SPACA9Q96E40 222 aaPredicted RBP22.22■■□□□ 1.15
ROM1-201ENST00000278833 PILRBQ9UKJ0 227 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 GK2Q14410 553 aaPredicted RBP22.22■■□□□ 1.15
ROM1-201ENST00000278833 MRPL14Q6P1L8 145 aaKnown RBP22.22■■□□□ 1.15
ROM1-201ENST00000278833 CFAP77Q6ZQR2 320 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 SLC25A42Q86VD7 318 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 FJX1Q86VR8 437 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 OR52N4Q8NGI2 321 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 SLC6A7Q99884 636 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 CRB3Q9BUF7 120 aa22.22■■□□□ 1.15
ROM1-201ENST00000278833 FXYD6-FXYD2A0A087WZ82 144 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 TRAV14DV4A0A0A6YYC5 116 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 MFSD2BA6NFX1 497 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 VSIG8P0DPA2 414 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 MPGP29372 298 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 RNASE10Q5GAN6 216 aaKnown RBP22.21■■□□□ 1.15
ROM1-201ENST00000278833 OR10K2Q6IF99 312 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 C11orf88Q6PI97 169 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 SLC51BQ86UW2 128 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 ACBD4Q8NC06 268 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 EMC6Q9BV81 110 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 ARL6Q9H0F7 186 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 FXYD6Q9H0Q3 95 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 ARRDC1-AS1Q9H2J1 176 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 WDR54Q9H977 334 aa22.21■■□□□ 1.15
ROM1-201ENST00000278833 PHF3Q92576 2039 aaKnown RBP22.21■■□□□ 1.15
ROM1-201ENST00000278833 LOC102723996A0A087X1L8 192 aa22.2■■□□□ 1.14
ROM1-201ENST00000278833 SHISA8B8ZZ34 492 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms