RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 ANXA3P12429 323 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 VEGFCP49767 419 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 SELENOPP49908 381 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 ZNF84P51523 738 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 CARD18P57730 90 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 ACTBP60709 375 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 ACTG1P63261 375 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 GUCA2AQ02747 115 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 TNK1Q13470 666 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 METTL11BQ5VVY1 283 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 SLC25A25Q6KCM7 469 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 JMJD6Q6NYC1 403 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 FAAP20Q6NZ36 180 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 LYPD6Q86Y78 171 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 OR4D6Q8NGJ1 314 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 HYLS1Q96M11 299 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 SFXN2Q96NB2 322 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 RBM24Q9BX46 236 aaKnown RBP11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 ULBP2Q9BZM5 246 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 SLA2Q9H6Q3 261 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 METTL17Q9H7H0 456 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 CNTD2Q9H8S5 307 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 BEX1Q9HBH7 125 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 PLSCR3Q9NRY6 295 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 RAB22AQ9UL26 194 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 ING4Q9UNL4 249 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 FLVCR2Q9UPI3 526 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 A0A1B0GUH1 482 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 A0A1W2PNU3 283 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 METTL21EPA6NDL7 271 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 NDUFB6O95139 128 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 RFPL3SP0C7P2 107 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 AKAIN1P0CW23 69 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 GTF2F2P13984 249 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 CNR1P21554 472 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 CTSSP25774 331 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 GDF1P27539 372 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 RCVRNP35243 200 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 GALK2Q01415 458 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 LINC00303Q3SY05 128 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 ZNF529Q6P280 563 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 ZNF782Q6ZMW2 699 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 FAM57BQ71RH2 274 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 PGAP1Q75T13 922 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 C20orf196Q8IYI0 205 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 ZIC4Q8N9L1 334 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 BEST4Q8NFU0 473 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 OR52N4Q8NGI2 321 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 OR13C9Q8NGT0 318 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 GPX8Q8TED1 209 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 PSMF1Q92530 271 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 SCPEP1Q9HB40 452 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 GPR84Q9NQS5 396 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 DEPPQ9NTK1 212 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 FOXD3Q9UJU5 478 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 RHBDD3Q9Y3P4 386 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 DOCK10Q96BY6 2186 aa11.42□□□□□ -0.58
SPTLC1-201ENST00000262554 SMLR1H3BR10 107 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 FABP7O15540 132 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 BPNT1O95861 308 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 LPLP06858 475 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 ZNF806P0C7X5 589 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 GSTT2P0CG29 244 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 SDHBP21912 280 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 CASRP41180 1078 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 ENDOGQ14249 297 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 RBMS2Q15434 407 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 BCL2A1Q16548 175 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 WIPI1Q5MNZ9 446 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 RAB12Q6IQ22 244 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 DOK3Q7L591 496 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 GGNQ86UU5 652 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 OR4C16Q8NGL9 310 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 NABP1Q96AH0 204 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 UTP23Q9BRU9 249 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 EDEM2Q9BV94 578 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 RANBP3Q9H6Z4 567 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 ZFP64Q9NPA5 681 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 TMEM9BQ9NQ34 198 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 LRFN1Q9P244 771 aa11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 MYEF2Q9P2K5 600 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 BOKQ9UMX3 212 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-201ENST00000262554 MEIS3P1A6NDR6 274 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 ICMTO60725 284 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 SULT1A3P0DMM9 295 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 SULT1A4P0DMN0 295 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 POU3F2P20265 443 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 CCL1P22362 96 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 PMPCAQ10713 525 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 ABHD17BQ5VST6 288 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 LRRC18Q8N456 261 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 OR2V1Q8NHB1 315 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 ITFG2Q969R8 447 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 PGAM5Q96HS1 289 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 FAM71F1Q96KD3 344 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 GAL3ST1Q99999 423 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 B3GNT4Q9C0J1 378 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 SLCO5A1Q9H2Y9 848 aa11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 GPN1Q9HCN4 374 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-201ENST00000262554 ABI3Q9P2A4 366 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms