RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 OR10A2Q9H208 303 aa8.56□□□□□ -1.04
PHGDH-215ENST00000641371 PPIL3Q9H2H8 161 aaKnown RBP8.56□□□□□ -1.04
PHGDH-215ENST00000641371 MIXL1Q9H2W2 232 aa8.56□□□□□ -1.04
PHGDH-215ENST00000641371 CALHM2Q9HA72 323 aa8.56□□□□□ -1.04
PHGDH-215ENST00000641371 BRD7Q9NPI1 651 aa8.56□□□□□ -1.04
PHGDH-215ENST00000641371 ZNF275Q9NSD4 429 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-215ENST00000641371 TBCCD1Q9NVR7 557 aa8.56□□□□□ -1.04
PHGDH-215ENST00000641371 STEAP1Q9UHE8 339 aa8.56□□□□□ -1.04
PHGDH-215ENST00000641371 V9GYH0 126 aa8.56□□□□□ -1.04
PHGDH-215ENST00000641371 PHF3Q92576 2039 aaKnown RBP8.56□□□□□ -1.04
PHGDH-215ENST00000641371 TNRC6AQ8NDV7 1962 aaKnown RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 A0A0A6YYH2 397 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 LOC390937A0A1W2PQ73 354 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 A6NJ64 397 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 K7ENP7 123 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 M0R135 149 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 SLC17A2O00624 439 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 CTDSPLO15194 276 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 RER1O15258 196 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 TBX1O43435 398 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 SULT1B1O43704 296 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 HPGDSO60760 199 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 SCGNO76038 276 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ALX3O95076 343 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 UBL3O95164 117 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 TTRP02766 147 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 CRHP06850 196 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 CD37P11049 281 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ZNF20P17024 532 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 IGFBP3P17936 291 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 MPGP29372 298 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ARR3P36575 388 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 GNALP38405 381 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 MNDAP41218 407 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 SOX2P48431 317 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 CAV3P56539 151 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 TMPRSS3P57727 454 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ZNF121P58317 390 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 PHYHD1Q5SRE7 291 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 TRIQKQ629K1 86 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 TMEM53Q6P2H8 277 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 INO80CQ6PI98 192 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ZNF813Q6ZN06 617 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 Q6ZSR3 168 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 SPATC1Q76KD6 591 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 LRRTM1Q86UE6 522 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 LYSMD2Q8IV50 215 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 TUSC5Q8IXB3 177 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ZNF433Q8N7K0 673 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 SAMD12Q8N8I0 201 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 OR6M1Q8NGM8 313 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 OR1F12Q8NHA8 337 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 PPP1R14BQ96C90 147 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ZNF799Q96GE5 643 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 PGAM5Q96HS1 289 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 COX4I2Q96KJ9 171 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ALKBH3Q96Q83 286 aaPredicted RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 UQCC2Q9BRT2 126 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 ABCG5Q9H222 651 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 CCDC86Q9H6F5 360 aaKnown RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 OPA3Q9H6K4 179 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 MOV10Q9HCE1 1003 aaKnown RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 SPRR3Q9UBC9 169 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 CLCF1Q9UBD9 225 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 EXTL2Q9UBQ6 330 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 MALT1Q9UDY8 824 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 FBXL3Q9UKT7 428 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 WASF3Q9UPY6 502 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 AK6Q9Y3D8 172 aaKnown RBP8.55□□□□□ -1.04
PHGDH-215ENST00000641371 LIPGQ9Y5X9 500 aa8.55□□□□□ -1.04
PHGDH-215ENST00000641371 CACNA1GO43497 2377 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 J3QW42 95 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 MAGEB3O15480 346 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 DOK2O60496 412 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 WDR1O75083 606 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 NCR1O76036 304 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 IGLV3-1P01715 115 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 HLA-DQB1P01920 261 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 ALDOBP05062 364 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 OCMP0CE72 109 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-215ENST00000641371 ATF1P18846 271 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 RAB3AP20336 220 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 BDKRB2P30411 391 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 AGTR1P30556 359 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 THBS4P35443 961 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 DDOSTP39656 456 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 OR3A2P47893 321 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 PITPNBP48739 271 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 INPP1P49441 399 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 PRKXP51817 358 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 OR10A3P58181 314 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 IL18Q14116 193 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 OXA1LQ15070 435 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 RAB11BQ15907 218 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 KRTAP27-1Q3LI81 207 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 CCDC92Q53HC0 331 aaPredicted RBP8.54□□□□□ -1.04
PHGDH-215ENST00000641371 PYDC2Q56P42 97 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 RNFT1Q5M7Z0 435 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 TSPO2Q5TGU0 170 aa8.54□□□□□ -1.04
PHGDH-215ENST00000641371 FBXW9Q5XUX1 488 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms