RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 TUBA1AQ71U36 451 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 FAM169BQ8N8A8 192 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 ZFP41Q8N8Y5 198 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 WDR31Q8NA23 367 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 OR1J2Q8NGS2 313 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 HSD17B8Q92506 261 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 S100PBPQ96BU1 408 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 YIPF6Q96EC8 236 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF799Q96GE5 643 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 C4orf45Q96LM5 186 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 DOK1Q99704 481 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 ACTR6Q9GZN1 396 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 GRIP1Q9Y3R0 1128 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 NBASA2RRP1 2371 aa16.19■□□□□ 0.18
SSBP4-212ENST00000601919 DPPA5A6NC42 116 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 C1QL1O75973 258 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 CRYGSP22914 178 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 GABRA5P31644 462 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF121P58317 390 aaPredicted RBP16.18■□□□□ 0.18
SSBP4-212ENST00000601919 SLC3A1Q07837 685 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 DOC2BQ14184 412 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 XKRXQ6PP77 449 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 CATSPERDQ86XM0 798 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 MS4A15Q8N5U1 240 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 CPEB3Q8NE35 698 aaKnown RBP16.18■□□□□ 0.18
SSBP4-212ENST00000601919 OR5AK2Q8NH90 309 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 RPS4Y2Q8TD47 263 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 FUNDC2Q9BWH2 189 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 FAM192AQ9GZU8 254 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 KCNJ16Q9NPI9 418 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 FAM206AQ9NX38 181 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 FRRS1LQ9P0K9 344 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 OR52A1Q9UKL2 312 aa16.18■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF503-AS2A6NEH8 195 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 FAM90A27PA6NNH2 459 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 SRSF10O75494 262 aaKnown RBP16.17■□□□□ 0.18
SSBP4-212ENST00000601919 SERPINA3P01011 423 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 ANXA2P07355 339 aaKnown RBP16.17■□□□□ 0.18
SSBP4-212ENST00000601919 APEX1P27695 318 aaKnown RBP16.17■□□□□ 0.18
SSBP4-212ENST00000601919 SSX1Q16384 188 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 TBC1D28Q2M2D7 210 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 KRTAP27-1Q3LI81 207 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 GPR107Q5VW38 600 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF704Q6ZNC4 412 aaPredicted RBP16.17■□□□□ 0.18
SSBP4-212ENST00000601919 CLVS1Q8IUQ0 354 aaPredicted RBP16.17■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF676Q8N7Q3 588 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 OR52H1Q8NGJ2 320 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 GHSRQ92847 366 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 RNASE6Q93091 150 aaKnown RBP16.17■□□□□ 0.18
SSBP4-212ENST00000601919 NOX3Q9HBY0 568 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 NUFIP1Q9UHK0 495 aaKnown RBP16.17■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF281Q9Y2X9 895 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 SLC25A15Q9Y619 301 aa16.17■□□□□ 0.18
SSBP4-212ENST00000601919 SIRT4Q9Y6E7 314 aaPredicted RBP16.17■□□□□ 0.18
SSBP4-212ENST00000601919 A0A1W2PR80 420 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 CCDC160A6NGH7 325 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 PNPP00491 289 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 IGKV3-15P01624 115 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 HLA-DPB1P04440 258 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 ACSM4P0C7M7 580 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 UBCP0CG48 685 aaKnown RBP16.16■□□□□ 0.18
SSBP4-212ENST00000601919 GALP22466 123 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 TGFBR2P37173 567 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 NANOS3P60323 173 aaKnown RBP16.16■□□□□ 0.18
SSBP4-212ENST00000601919 MFGE8Q08431 387 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-212ENST00000601919 PPA1Q15181 289 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 C3orf36Q3SXR2 165 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 YIF1BQ5BJH7 314 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 WDR38Q5JTN6 314 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 GDPGP1Q6ZNW5 385 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 ANKRD13BQ86YJ7 626 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 PRSS35Q8N3Z0 413 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF808Q8N4W9 903 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-212ENST00000601919 SLC30A7Q8NEW0 376 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF420Q8TAQ5 688 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-212ENST00000601919 SLC7A6Q92536 515 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 THRSPQ92748 146 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 RNF166Q96A37 237 aaPredicted RBP16.16■□□□□ 0.18
SSBP4-212ENST00000601919 PGAM5Q96HS1 289 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 BCL7BQ9BQE9 202 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 TMED9Q9BVK6 235 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 PBOV1Q9GZY1 135 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 BRD7Q9NPI1 651 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 G6PC2Q9NQR9 355 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 STUB1Q9UNE7 303 aa16.16■□□□□ 0.18
SSBP4-212ENST00000601919 C5orf49A4QMS7 147 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 A6NHS1 94 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 OR4C45A6NMZ5 311 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 ZFPL1O95159 310 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 DBHP09172 617 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF14P17017 642 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-212ENST00000601919 IDH3GP51553 393 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-212ENST00000601919 TMBIM6P55061 237 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 RSPO1Q2MKA7 263 aaPredicted RBP16.15■□□□□ 0.18
SSBP4-212ENST00000601919 TMEM244Q5VVB8 128 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 FAM57BQ71RH2 274 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 ZNF584Q8IVC4 421 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 ELMOD2Q8IZ81 293 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 IL17RDQ8NFM7 739 aa16.15■□□□□ 0.18
SSBP4-212ENST00000601919 RAB2BQ8WUD1 216 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms