RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 ZNF3P17036 446 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 HNF1AP20823 631 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 TNFSF4P23510 183 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 CBX1P83916 185 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 BNIP1Q12981 228 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 FAM120AOSQ5T036 256 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 OR5AS1Q8N127 324 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 IQCF1Q8N6M8 205 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 OR2Z1Q8NG97 314 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 TIMD4Q96H15 378 aa19.18■□□□□ 0.66
CCDC9-204ENST00000599398 CADM1Q9BY67 442 aaKnown RBP19.18■□□□□ 0.66
CCDC9-204ENST00000599398 ATRQ13535 2644 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 TCRBV3S1A0A5B6 114 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 GSC2O15499 205 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 FKBP6O75344 327 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 CD55P08174 381 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 POU1F1P28069 291 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 FMO3P31513 532 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 CDK5R2Q13319 367 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 RSPO1Q2MKA7 263 aaPredicted RBP19.17■□□□□ 0.66
CCDC9-204ENST00000599398 OR6K6Q8NGW6 343 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 RAB1CQ92928 201 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 OTULINQ96BN8 352 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 MAP6Q96JE9 813 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 WDR76Q9H967 626 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 ZNF556Q9HAH1 456 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 PNRC2Q9NPJ4 139 aaKnown RBP19.17■□□□□ 0.66
CCDC9-204ENST00000599398 WIPI2Q9Y4P8 454 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 COMMD3-BMI1R4GMX3 469 aa19.17■□□□□ 0.66
CCDC9-204ENST00000599398 DYSFO75923 2080 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 TANC2Q9HCD6 1990 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 B4DSR2 109 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 SPARCP09486 303 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 ACSM4P0C7M7 580 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 CLUP10909 449 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 SPI1P17947 270 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 SLC25A1P53007 311 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 SLC3A1Q07837 685 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 CR1LQ2VPA4 569 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 SPRNQ5BIV9 151 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 OR2T2Q6IF00 324 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 FBXW12Q6X9E4 464 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 Q6ZR03 302 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 HS3ST5Q8IZT8 346 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 ZNF511Q8NB15 262 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 C1orf159Q96HA4 380 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 C1QTNF5Q9BXJ0 243 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 NMNAT2Q9BZQ4 307 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 LPAR2Q9HBW0 351 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 CMC2Q9NRP2 79 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 DNAJB9Q9UBS3 223 aa19.16■□□□□ 0.66
CCDC9-204ENST00000599398 SVEP1Q4LDE5 3571 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 FAM157AC9JC47 383 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 LCATP04180 440 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 SRD5A1P18405 259 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 GRK5P34947 590 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 SLC6A9P48067 706 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 ENTPD1P49961 510 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 RASSF2P50749 326 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 TPTEP56180 551 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 KRTAP27-1Q3LI81 207 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 DCXRQ7Z4W1 244 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 ATG16L2Q8NAA4 619 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 SPTSSAQ969W0 71 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 HCAR1Q9BXC0 346 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 MED20Q9H944 212 aa19.15■□□□□ 0.66
CCDC9-204ENST00000599398 ISPDA4D126 451 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 FAM183AA6NL82 134 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 SURF4O15260 269 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 TNFRSF1AP19438 455 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 PRKACGP22612 351 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 LMO4P61968 165 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 SLC27A4Q6P1M0 643 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 COLCA1Q6ZS62 124 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 PEG10Q86TG7 708 aaKnown RBP19.14■□□□□ 0.65
CCDC9-204ENST00000599398 NAA40Q86UY6 237 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 GLCCI1Q86VQ1 547 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 BHLHE23Q8NDY6 225 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 OR10S1Q8NGN2 331 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 ITLN1Q8WWA0 313 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 ZNF582Q96NG8 517 aaPredicted RBP19.14■□□□□ 0.65
CCDC9-204ENST00000599398 ZNF665Q9H7R5 613 aa19.14■□□□□ 0.65
CCDC9-204ENST00000599398 TMEFF2Q9UIK5 374 aaPredicted RBP19.14■□□□□ 0.65
CCDC9-204ENST00000599398 M0R135 149 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 ZNF593O00488 134 aaPredicted RBP19.13■□□□□ 0.65
CCDC9-204ENST00000599398 PSKH1P11801 424 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 BLVRAP53004 296 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 DVL1P1P54792 670 aaPredicted RBP19.13■□□□□ 0.65
CCDC9-204ENST00000599398 MALLQ13021 153 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 GINS1Q14691 196 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 TAF13Q15543 124 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 ZNF771Q7L3S4 317 aaPredicted RBP19.13■□□□□ 0.65
CCDC9-204ENST00000599398 PAPD5Q8NDF8 572 aaKnown RBP19.13■□□□□ 0.65
CCDC9-204ENST00000599398 OR8G5Q8NG78 346 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 SLCO4A1Q96BD0 722 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 RAB39BQ96DA2 213 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 ZNF799Q96GE5 643 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 COPS4Q9BT78 406 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 CENPMQ9NSP4 180 aa19.13■□□□□ 0.65
CCDC9-204ENST00000599398 IL19Q9UHD0 177 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms