RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 A6NIZ1 184 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 XKRYO14609 159 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 FOXH1O75593 365 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 PTHP01270 115 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 MT-ND5P03915 603 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 RNASE1P07998 156 aaKnown RBP13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 OSMP13725 252 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 ZNF26P17031 533 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 CCNOP22674 350 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 NOS3P29474 1203 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 RAP1BP61224 184 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 RAP1AP62834 184 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 PLP2Q04941 152 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 ZNF154Q13106 437 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 SLC36A3Q495N2 470 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 CLEC12AQ5QGZ9 265 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 FAM205BPQ63HN1 556 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 CBR4Q8N4T8 237 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 POM121L2Q96KW2 1035 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 ERMAPQ96PL5 475 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 GPX7Q96SL4 187 aaPredicted RBP13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 IL20Q9NYY1 176 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 ENOPH1Q9UHY7 261 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 AUP1Q9Y679 476 aa13.87□□□□□ -0.19
SHKBP1-215ENST00000597649 NPIPB13A6NJU9 1138 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 POM121CA8CG34 1229 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 NPIPB4C9JG80 1138 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 MGRN1O60291 552 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 PPP1R3DO95685 299 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 IGHV2-70P01814 119 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 IGHG1P01857 330 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 IGHMP01871 453 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 SBK2P0C263 348 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 ACADSP16219 412 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 ZNF12P17014 697 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 STOMP27105 288 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 CDAP32320 146 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 APLNRP35414 380 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 CLRN1P58418 232 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 FXYD6P3P58550 94 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 SEC61A1P61619 476 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 IL13RA1P78552 427 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 SLC9A3R2Q15599 337 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 ZNF718Q3SXZ3 478 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 NRN1LQ496H8 165 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 ARMCX4Q5H9R4 360 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 GPR139Q6DWJ6 353 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 SYT14Q8NB59 555 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 SLC25A40Q8TBP6 338 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 KLF14Q8TD94 323 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 ST7LQ8TDW4 575 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 ASB10Q8WXI3 467 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 ZNF570Q96NI8 536 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 DCLRE1CQ96SD1 692 aaKnown RBP13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 TEX12Q9BXU0 123 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 OR2J1Q9GZK6 312 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 NRIP3Q9NQ35 241 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 BAIAP2Q9UQB8 552 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 POLR3KQ9Y2Y1 108 aaPredicted RBP13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 ADAM18Q9Y3Q7 739 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 NPTNQ9Y639 398 aa13.86□□□□□ -0.19
SHKBP1-215ENST00000597649 EI24O14681 340 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 IDH3BO43837 385 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 ADH4P08319 380 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 MDKP21741 143 aaPredicted RBP13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 SDHAP31040 664 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 SLC6A9P48067 706 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 ALDH3A2P51648 485 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 RAD23AP54725 363 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 HSF2Q03933 536 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 SLC34A1Q06495 639 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 SLC3A1Q07837 685 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 SRSF4Q08170 494 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 MBNL2Q5VZF2 373 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 KDM4DQ6B0I6 523 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 LEG1Q6P5S2 330 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 JAZF1Q86VZ6 243 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 OR2T33Q8NG76 320 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 AKR7LQ8NHP1 331 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 NABP1Q96AH0 204 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 Q96M85 177 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 EGLN1Q9GZT9 426 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 ZMAT3Q9HA38 289 aaKnown RBP13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 SIAEQ9HAT2 523 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 RNPEPL1Q9HAU8 725 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 MSL2Q9HCI7 577 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 UGT2A1Q9Y4X1 527 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 INSIG2Q9Y5U4 225 aa13.85□□□□□ -0.19
SHKBP1-215ENST00000597649 IGKV1D-43A0A0B4J1Z2 117 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 TEX13CA0A0J9YWL9 993 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 C5orf49A4QMS7 147 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 CLDN34H7C241 214 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 SOCS2O14508 198 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 IMPA2O14732 288 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 ARPC3O15145 178 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 MITFO75030 526 aaPredicted RBP13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 TRMUO75648 421 aaKnown RBP13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 NGFP01138 241 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 NR2C1P13056 603 aa13.84□□□□□ -0.19
SHKBP1-215ENST00000597649 ZNF32P17041 273 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms