RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 C6orf52Q5T4I8 152 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 HIPK1Q86Z02 1210 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 PARP8Q8N3A8 854 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 IQCF1Q8N6M8 205 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 ATG16L2Q8NAA4 619 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 ZNF511Q8NB15 262 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 OR10S1Q8NGN2 331 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 GTF3AQ92664 365 aaKnown RBP11.88□□□□□ -0.51
GGA3-215ENST00000582821 C1orf159Q96HA4 380 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 WDR76Q9H967 626 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 MARCH7Q9H992 704 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 SLC25A19Q9HC21 320 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 YAE1D1Q9NRH1 226 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 ZNF275Q9NSD4 429 aaPredicted RBP11.88□□□□□ -0.51
GGA3-215ENST00000582821 DECR2Q9NUI1 292 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 DDX28Q9NUL7 540 aaKnown RBP11.88□□□□□ -0.51
GGA3-215ENST00000582821 TMEM160Q9NX00 188 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 COMMD3-BMI1R4GMX3 469 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 DYSFO75923 2080 aa11.88□□□□□ -0.51
GGA3-215ENST00000582821 IGHV1-69-2A0A0G2JMI3 117 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 A8MV72 311 aaPredicted RBP11.87□□□□□ -0.51
GGA3-215ENST00000582821 SURF4O15260 269 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 TIMM8AO60220 97 aaPredicted RBP11.87□□□□□ -0.51
GGA3-215ENST00000582821 GLCEO94923 617 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 CLUP10909 449 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 PAICSP22234 425 aaKnown RBP11.87□□□□□ -0.51
GGA3-215ENST00000582821 FASP25445 335 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 GPR6P46095 362 aaPredicted RBP11.87□□□□□ -0.51
GGA3-215ENST00000582821 DAPP51397 102 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 CRISP1P54107 249 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 TPTEP56180 551 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 LYPD4Q6UWN0 246 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 RHOUQ7L0Q8 258 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 ELMOD3Q96FG2 381 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 HCAR1Q9BXC0 346 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 TEX12Q9BXU0 123 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 EGLN1Q9GZT9 426 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 SAP30LQ9HAJ7 183 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 PAPOLBQ9NRJ5 636 aaKnown RBP11.87□□□□□ -0.51
GGA3-215ENST00000582821 TANC2Q9HCD6 1990 aa11.87□□□□□ -0.51
GGA3-215ENST00000582821 WNK2Q9Y3S1 2297 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 FAM183AA6NL82 134 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 F5H5K5 113 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 SPRY3O43610 288 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 CIB2O75838 187 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 PSKH1P11801 424 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 FCGR1AP12314 374 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 ESRRGP62508 458 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 HLXQ14774 488 aaPredicted RBP11.86□□□□□ -0.51
GGA3-215ENST00000582821 TRIP10Q15642 601 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 TSTQ16762 297 aaKnown RBP11.86□□□□□ -0.51
GGA3-215ENST00000582821 Q6ZR03 302 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 CCDC121Q6ZUS5 278 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 USP51Q70EK9 711 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 DCXRQ7Z4W1 244 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 ST7LQ8TDW4 575 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 SPTSSAQ969W0 71 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 MSI2Q96DH6 328 aaKnown RBP11.86□□□□□ -0.51
GGA3-215ENST00000582821 MED20Q9H944 212 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 MSL2Q9HCI7 577 aa11.86□□□□□ -0.51
GGA3-215ENST00000582821 A0A1B0GWJ7 208 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 LRP5LA4QPB2 252 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 IQCF6A8MYZ5 107 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 PRR23D1E9PI22 279 aaPredicted RBP11.85□□□□□ -0.51
GGA3-215ENST00000582821 G3V2T6 193 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 M0R135 149 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 PRODHO43272 600 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 TPD52L2O43399 206 aaKnown RBP11.85□□□□□ -0.51
GGA3-215ENST00000582821 CDC14BO60729 498 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 LCATP04180 440 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 PRR23D2P0DMB1 279 aaPredicted RBP11.85□□□□□ -0.51
GGA3-215ENST00000582821 GSTT1P30711 240 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 RPS27P42677 84 aaKnown RBP11.85□□□□□ -0.51
GGA3-215ENST00000582821 HFEQ30201 348 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 SLC35D3Q5M8T2 416 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 KDM4DQ6B0I6 523 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 DRAM2Q6UX65 266 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 SHFQ7M4L6 423 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 NAA40Q86UY6 237 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 ZDHHC13Q8IUH4 622 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 TIGD4Q8IY51 512 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 OR8G5Q8NG78 346 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 OR6K6Q8NGW6 343 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 SLAMF6Q96DU3 332 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 ZNF799Q96GE5 643 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 INTS14Q96SY0 518 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 KCNJ15Q99712 375 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 GABARAPL1Q9H0R8 117 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 PTTG3PQ9NZH4 202 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 KIF17Q9P2E2 1029 aa11.85□□□□□ -0.51
GGA3-215ENST00000582821 LOC100289279A0A1B0GTE1 492 aa11.84□□□□□ -0.51
GGA3-215ENST00000582821 PPIHO43447 177 aaKnown RBP11.84□□□□□ -0.51
GGA3-215ENST00000582821 LMX1BO60663 402 aa11.84□□□□□ -0.51
GGA3-215ENST00000582821 SPARCP09486 303 aa11.84□□□□□ -0.51
GGA3-215ENST00000582821 SELEP16581 610 aa11.84□□□□□ -0.51
GGA3-215ENST00000582821 TNFRSF1AP19438 455 aa11.84□□□□□ -0.51
GGA3-215ENST00000582821 TNFSF4P23510 183 aa11.84□□□□□ -0.51
GGA3-215ENST00000582821 IL2RGP31785 369 aa11.84□□□□□ -0.51
GGA3-215ENST00000582821 ACTR3P61158 418 aa11.84□□□□□ -0.51
GGA3-215ENST00000582821 TNFAIP6P98066 277 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms