RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 SETD9Q8NE22 299 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 BBS1Q8NFJ9 593 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 OR1F12Q8NHA8 337 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 AKR7LQ8NHP1 331 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 OTOSQ8NHW6 89 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 OTULINQ96BN8 352 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 IL4I1Q96RQ9 567 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 MNTQ99583 582 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 ATF6BQ99941 703 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 APOL4Q9BPW4 351 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 BCL2L14Q9BZR8 327 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 WDR76Q9H967 626 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 PNRC2Q9NPJ4 139 aaKnown RBP8.53□□□□□ -1.04
GGA3-209ENST00000580646 TUBG2Q9NRH3 451 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 DDX28Q9NUL7 540 aaKnown RBP8.53□□□□□ -1.04
GGA3-209ENST00000580646 PLEK2Q9NYT0 353 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 GDF2Q9UK05 429 aaPredicted RBP8.53□□□□□ -1.04
GGA3-209ENST00000580646 FBXO9Q9UK97 447 aaPredicted RBP8.53□□□□□ -1.04
GGA3-209ENST00000580646 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.53□□□□□ -1.045e-14■■■■■ 87.8
GGA3-209ENST00000580646 HSPE1-MOB4S4R3N1 261 aa8.53□□□□□ -1.04
GGA3-209ENST00000580646 LOC100509620A0A075B734 347 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 TVP23AA6NH52 213 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 VSTM5A8MXK1 200 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ZNF878C9JN71 531 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 H3BSA7 217 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ZNF593O00488 134 aaPredicted RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 RER1O15258 196 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 HEXAP06865 529 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ZNF12P17014 697 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 APEX1P27695 318 aaKnown RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 APOBEC3AP31941 199 aaPredicted RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 OTX1P32242 354 aaPredicted RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 TTKP33981 857 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 RAD52P43351 418 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 HTR5AP47898 357 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 RGS6P49758 472 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 GDI2P50395 445 aaKnown RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 NUDT6P53370 316 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 RPS7P62081 194 aaKnown RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 ADARB1P78563 741 aaKnown RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 HGFACQ04756 655 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 SPCS2Q15005 226 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 CLEC12BQ2HXU8 276 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ZNF691Q5VV52 312 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 B3GLCTQ6Y288 498 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 Q6ZNX1 250 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 CFAP77Q6ZQR2 320 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 SLC16A9Q7RTY1 509 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 DPY19L4Q7Z388 723 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ERI1Q8IV48 349 aaKnown RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 LINC00346Q8IVM7 164 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ENTHD1Q8IYW4 607 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ZNF511Q8NB15 262 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 RHOXF1Q8NHV9 184 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ST7LQ8TDW4 575 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 NRG4Q8WWG1 115 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ZMYND19Q96E35 227 aaPredicted RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 MAP6Q96JE9 813 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 Q96MT0 163 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 COG8Q96MW5 612 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ZNF582Q96NG8 517 aaPredicted RBP8.52□□□□□ -1.05
GGA3-209ENST00000580646 ADI1Q9BV57 179 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ELOVL3Q9HB03 270 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 PLGRKTQ9HBL7 147 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 CDH20Q9HBT6 801 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 CA10Q9NS85 328 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 CBLN4Q9NTU7 201 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 TMEM14AQ9Y6G1 99 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 ATP23Q9Y6H3 246 aa8.52□□□□□ -1.05
GGA3-209ENST00000580646 C5orf49A4QMS7 147 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 M0R129 80 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 PHYHO14832 338 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 NDUFS7O75251 213 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 IGHV4-39P01824 125 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 SPARCP09486 303 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 PSKH1P11801 424 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 CAPGP40121 348 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 EVX1P49640 407 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 FABP6P51161 128 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 UCP2P55851 309 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 GRB2P62993 217 aaKnown RBP8.51□□□□□ -1.05
GGA3-209ENST00000580646 DBPQ10586 325 aaPredicted RBP8.51□□□□□ -1.05
GGA3-209ENST00000580646 SNTB2Q13425 540 aaKnown RBP8.51□□□□□ -1.05
GGA3-209ENST00000580646 TNK1Q13470 666 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 EFNB3Q15768 340 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 CORO6Q6QEF8 472 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 DEGS2Q6QHC5 323 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 LYPD4Q6UWN0 246 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 DCXRQ7Z4W1 244 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 FBXL14Q8N1E6 418 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 MUC15Q8N387 334 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 OR6N2Q8NGY6 317 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 RNF133Q8WVZ7 376 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 CNN2Q99439 309 aaKnown RBP8.51□□□□□ -1.05
GGA3-209ENST00000580646 BARX1Q9HBU1 254 aaPredicted RBP8.51□□□□□ -1.05
GGA3-209ENST00000580646 ADGRL4Q9HBW9 690 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 EIF3KQ9UBQ5 218 aaKnown RBP8.51□□□□□ -1.05
GGA3-209ENST00000580646 CSPG4Q6UVK1 2322 aa8.51□□□□□ -1.05
GGA3-209ENST00000580646 hCG_2014768A0A024R1R8 64 aa8.5□□□□□ -1.05
GGA3-209ENST00000580646 SELENOFO60613 162 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms