RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 WDR76Q9H967 626 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 TBC1D23Q9NUY8 699 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 ATPIF1Q9UII2 106 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 POMPQ9Y244 141 aa10.76□□□□□ -0.69
NPLOC4-213ENST00000573519 TRAV20A0A0B4J274 112 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 F5H5K5 113 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 BHLHE40O14503 412 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 GNGT2O14610 69 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 PLPP2O43688 288 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 PNPP00491 289 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 IGHV2-5P01817 119 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 RAC2P15153 192 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 ZNF823P16415 610 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 PYCR1P32322 319 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 RBMXP38159 391 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 HIST1H3AP68431 136 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 KRTAP24-1Q3LI83 254 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 HIST2H3PS2Q5TEC6 136 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 LIPNQ5VXI9 398 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 OR2T2Q6IF00 324 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 SLC18B1Q6NT16 456 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 CFAP77Q6ZQR2 320 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 Q6ZR03 302 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 HIST2H3AQ71DI3 136 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 ZBTB46Q86UZ6 589 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 BHLHE23Q8NDY6 225 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 PROKR2Q8NFJ6 384 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 GIPC3Q8TF64 312 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 ITLN1Q8WWA0 313 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 POP5Q969H6 163 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 ATF6BQ99941 703 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 NIPSNAP1Q9BPW8 284 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 TSSK6Q9BXA6 273 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 DGCR6LQ9BY27 220 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 OCEL1Q9H607 264 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 TMEM106BQ9NUM4 274 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 ARMC1Q9NVT9 282 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 DCAF16Q9NXF7 216 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 NPTNQ9Y639 398 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 MALRD1Q5VYJ5 2156 aa10.75□□□□□ -0.69
NPLOC4-213ENST00000573519 TCRBV3S1A0A5B6 114 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 TVP23AA6NH52 213 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 J3QW42 95 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 SURF4O15260 269 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 TCF21O43680 179 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 FKBP6O75344 327 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 DEAF1O75398 565 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 SBK2P0C263 348 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 RPS27P42677 84 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 PRSS12P56730 875 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 HS3ST5Q8IZT8 346 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 OR10AD1Q8NGE0 317 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 OR51L1Q8NGJ5 315 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 OR4Q3Q8NH05 313 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 ST7LQ8TDW4 575 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 SLCO4A1Q96BD0 722 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 ZNF582Q96NG8 517 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 OR2V2Q96R30 315 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 FEVQ99581 238 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 IL20Q9NYY1 176 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 PDP1Q9P0J1 537 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 IL19Q9UHD0 177 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 PCDHB10Q9UN67 800 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 PPP1R3CQ9UQK1 317 aa10.74□□□□□ -0.69
NPLOC4-213ENST00000573519 MXRA5Q9NR99 2828 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 A0A0G2JMP0 313 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 A0A0X1KG70 313 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 LCATP04180 440 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 GGT2P36268 569 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 LCN2P80188 198 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 CBX1P83916 185 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 ECH1Q13011 328 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 MALLQ13021 153 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 ZNF362Q5T0B9 420 aaPredicted RBP10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 DCAF12L2Q5VW00 463 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 SLC27A4Q6P1M0 643 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 FBXW12Q6X9E4 464 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 RFLNBQ8N5W9 214 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 IQCF1Q8N6M8 205 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 ZNF283Q8N7M2 679 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 SLC37A3Q8NCC5 494 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 OR8G5Q8NG78 346 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 OR4M2Q8NGB6 313 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 OR9Q1Q8NGQ5 310 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 OR2T4Q8NH00 348 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 ZNRF4Q8WWF5 429 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 DDOQ99489 341 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 C19orf24Q9BVV8 132 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 HCAR1Q9BXC0 346 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 MRPL22Q9NWU5 206 aaKnown RBP10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 CYB5R1Q9UHQ9 305 aa10.73□□□□□ -0.69
NPLOC4-213ENST00000573519 LOC105371242A0A075B767 164 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 IGHV3-64DA0A0J9YX35 117 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 H0YL77 283 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 E2F6O75461 281 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 RGS9O75916 674 aaPredicted RBP10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 IGHV2-70P01814 119 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 GYPBP06028 91 aa10.72□□□□□ -0.69
NPLOC4-213ENST00000573519 SPARCP09486 303 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms