RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 ZNF556Q9HAH1 456 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 PPP1R3CQ9UQK1 317 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 NPTNQ9Y639 398 aa14.2□□□□□ -0.14
USB1-211ENST00000565662 OR6C68A6NDL8 312 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 IQCF6A8MYZ5 107 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 DCTN6O00399 190 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 PHF1O43189 567 aaPredicted RBP14.19□□□□□ -0.14
USB1-211ENST00000565662 TCF21O43680 179 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 FOXH1O75593 365 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 PAICSP22234 425 aaKnown RBP14.19□□□□□ -0.14
USB1-211ENST00000565662 FMO3P31513 532 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 SLC15A1P46059 708 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 RASSF2P50749 326 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 SLC25A1P53007 311 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 RAD23AP54725 363 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 MZT1Q08AG7 82 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 SNCBQ16143 134 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 ZNF181Q2M3W8 571 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 CLEC12AQ5QGZ9 265 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 RHOUQ7L0Q8 258 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 ZNF283Q8N7M2 679 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 CCDC124Q96CT7 223 aaKnown RBP14.19□□□□□ -0.14
USB1-211ENST00000565662 TSSK2Q96PF2 358 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 SOX7Q9BT81 388 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 NARFLQ9H6Q4 476 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 MSL2Q9HCI7 577 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 DDX28Q9NUL7 540 aaKnown RBP14.19□□□□□ -0.14
USB1-211ENST00000565662 TMEM106BQ9NUM4 274 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 TAS2R1Q9NYW7 299 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 TREM2Q9NZC2 230 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 METRNQ9UJH8 293 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 STARD10Q9Y365 291 aa14.19□□□□□ -0.14
USB1-211ENST00000565662 DHRS12A0PJE2 317 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 ISPDA4D126 451 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 M0R135 149 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 GNGT2O14610 69 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 GYG2O15488 501 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 MPZL1O95297 269 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 CST1P01037 141 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 MVKQ03426 396 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 KRTAP27-1Q3LI81 207 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 TEX30Q5JUR7 227 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 DRAM2Q6UX65 266 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 OR10G2Q8NGC3 310 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 BCAS4Q8TDM0 211 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 ZNF799Q96GE5 643 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 TSSK6Q9BXA6 273 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 TOR3AQ9H497 397 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 EGLN3Q9H6Z9 239 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 PCDHB10Q9UN67 800 aa14.18□□□□□ -0.14
USB1-211ENST00000565662 ZNF878C9JN71 531 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 GASTP01350 101 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 ACSM4P0C7M7 580 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 GGT2P36268 569 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 MDH2P40926 338 aaKnown RBP14.17□□□□□ -0.14
USB1-211ENST00000565662 ENTPD1P49961 510 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 GRB2P62993 217 aaKnown RBP14.17□□□□□ -0.14
USB1-211ENST00000565662 FLOT2Q14254 428 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 MEP1BQ16820 701 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 SLC35F1Q5T1Q4 408 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 RINLQ6ZS11 566 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 PGAP1Q75T13 922 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.17□□□□□ -0.14
USB1-211ENST00000565662 KLBQ86Z14 1044 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 GIPC3Q8TF64 312 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 ZFAND2BQ8WV99 257 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 OR2V2Q96R30 315 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 JMJD8Q96S16 334 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 MDFIQ99750 246 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 SLC30A2Q9BRI3 323 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 THTPAQ9BU02 230 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 CMC2Q9NRP2 79 aa14.17□□□□□ -0.14
USB1-211ENST00000565662 A0A1B0GWJ7 208 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 FAM157AC9JC47 383 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 F5H5K5 113 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 DEAF1O75398 565 aaPredicted RBP14.16□□□□□ -0.14
USB1-211ENST00000565662 IRF2P14316 349 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 CFL1P23528 166 aaKnown RBP14.16□□□□□ -0.14
USB1-211ENST00000565662 OTX1P32242 354 aaPredicted RBP14.16□□□□□ -0.14
USB1-211ENST00000565662 GRK5P34947 590 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 BTG1P62324 171 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 KCNJ8Q15842 424 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 PCK2Q16822 640 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 AVPI1Q5T686 147 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 DCAF12L2Q5VW00 463 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 SHFQ7M4L6 423 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 MRPL21Q7Z2W9 205 aaKnown RBP14.16□□□□□ -0.14
USB1-211ENST00000565662 SPERTQ8NA61 448 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 ATG16L2Q8NAA4 619 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 PLPP7Q8NBV4 271 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 SLC37A3Q8NCC5 494 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 ZNF418Q8TF45 676 aaPredicted RBP14.16□□□□□ -0.14
USB1-211ENST00000565662 ITFG2Q969R8 447 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 RBM4Q9BWF3 364 aaKnown RBP14.16□□□□□ -0.14
USB1-211ENST00000565662 CHID1Q9BWS9 393 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 PRRG3Q9BZD7 231 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 TRIM36Q9NQ86 728 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 TMEM100Q9NV29 134 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 PTTG3PQ9NZH4 202 aa14.16□□□□□ -0.14
USB1-211ENST00000565662 LRCH1Q9Y2L9 728 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms