RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 UPRTQ96BW1 309 aa14.56□□□□□ -0.08
CRTC3-208ENST00000560098 NEIL1Q96FI4 390 aaPredicted RBP14.56□□□□□ -0.08
CRTC3-208ENST00000560098 PLEKHA8Q96JA3 519 aa14.56□□□□□ -0.08
CRTC3-208ENST00000560098 TMEM246Q9BRR3 403 aa14.56□□□□□ -0.08
CRTC3-208ENST00000560098 FAM32AQ9Y421 112 aaKnown RBP14.56□□□□□ -0.08
CRTC3-208ENST00000560098 LHFPL6Q9Y693 200 aa14.56□□□□□ -0.08
CRTC3-208ENST00000560098 IGHV3-64DA0A0J9YX35 117 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 POM121CA8CG34 1229 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 IQCF6A8MYZ5 107 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 F5H5P2 479 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 TXNDC12O95881 172 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 PLATP00750 562 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 CRABP1P29762 137 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 CENPAP49450 140 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 RPS6KA3P51812 740 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 FXYD6P3P58550 94 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 MEP1BQ16820 701 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 ZNF404Q494X3 552 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 C8orf82Q6P1X6 216 aaPredicted RBP14.55□□□□□ -0.08
CRTC3-208ENST00000560098 DNM1P34Q6PK57 102 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.55□□□□□ -0.08
CRTC3-208ENST00000560098 JAZF1Q86VZ6 243 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 C1orf87Q8N0U7 546 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 BHLHE23Q8NDY6 225 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 DACT3Q96B18 629 aaPredicted RBP14.55□□□□□ -0.08
CRTC3-208ENST00000560098 TSSK2Q96PF2 358 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 TMEM100Q9NV29 134 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 NDUFAF4Q9P032 175 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 AURKCQ9UQB9 309 aa14.55□□□□□ -0.08
CRTC3-208ENST00000560098 SOX21Q9Y651 276 aaPredicted RBP14.55□□□□□ -0.08
CRTC3-208ENST00000560098 TRAV40A0A0B4J280 105 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 KIR2DS1A0A191URI9 304 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 UNC119BA6NIH7 251 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 DCTN6O00399 190 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 NCK1P16333 377 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 SELEP16581 610 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 RHCEP18577 417 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 COX10Q12887 443 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 CORO6Q6QEF8 472 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 COLCA1Q6ZS62 124 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 NLRC3Q7RTR2 1065 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 OR8B3Q8NGG8 313 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 OR8B2Q96RD0 313 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 KCTD14Q9BQ13 255 aaPredicted RBP14.54□□□□□ -0.08
CRTC3-208ENST00000560098 HCAR1Q9BXC0 346 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 WDR76Q9H967 626 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 EFCAB1Q9HAE3 211 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 KRCC1Q9NPI7 259 aaPredicted RBP14.54□□□□□ -0.08
CRTC3-208ENST00000560098 RPS6KA6Q9UK32 745 aa14.54□□□□□ -0.08
CRTC3-208ENST00000560098 TRBV4-1A0A0J9YWV2 114 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 A0A1B0GWJ7 208 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 NDUFAB1O14561 156 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 FPR3P25089 353 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 PMELP40967 661 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 PITPNBP48739 271 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 SEC23BQ15437 767 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 RSPO1Q2MKA7 263 aaPredicted RBP14.53□□□□□ -0.08
CRTC3-208ENST00000560098 FAM201AQ5SY85 155 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 SMARCD3Q6STE5 483 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 TAF15Q92804 592 aaKnown RBP eCLIP14.53□□□□□ -0.08
CRTC3-208ENST00000560098 B9D1Q9UPM9 204 aa14.53□□□□□ -0.08
CRTC3-208ENST00000560098 IGLV1-36A0A0B4J1U3 117 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 PPP1R3DO95685 299 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 HLA-DPB1P04440 258 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 IRF2P14316 349 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 GATA4P43694 442 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 KRTAP27-1Q3LI81 207 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 C16orf87Q6PH81 154 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 HACD2Q6Y1H2 254 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 OR6V1Q8N148 313 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 C7orf34Q96L11 122 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 ERMAPQ96PL5 475 aaPredicted RBP14.52□□□□□ -0.08
CRTC3-208ENST00000560098 NUDT16L1Q9BRJ7 211 aaKnown RBP14.52□□□□□ -0.08
CRTC3-208ENST00000560098 SLITRK2Q9H156 845 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 SRA1Q9HD15 236 aaKnown RBP14.52□□□□□ -0.08
CRTC3-208ENST00000560098 CLN8Q9UBY8 286 aa14.52□□□□□ -0.08
CRTC3-208ENST00000560098 MDFIC2A0A1B0GVS7 189 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 F5H5K5 113 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 CCDC22O60826 627 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 ACSM4P0C7M7 580 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 MDH1P40925 334 aaKnown RBP14.51□□□□□ -0.09
CRTC3-208ENST00000560098 NUDT2P50583 147 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 MAB21L1Q13394 359 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 GK2Q14410 553 aaPredicted RBP14.51□□□□□ -0.09
CRTC3-208ENST00000560098 SLC18B1Q6NT16 456 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 TREML4Q6UXN2 200 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 DCDC5Q6ZRR9 648 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 FITM2Q8N6M3 262 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 CELF2-AS1Q8N7Q2 184 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 SLC26A10Q8NG04 563 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 OR10S1Q8NGN2 331 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 OR52J3Q8NH60 311 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 ERGIC1Q969X5 290 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 TMIGD2Q96BF3 282 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 DHRS1Q96LJ7 313 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 PITX2Q99697 317 aa14.51□□□□□ -0.09
CRTC3-208ENST00000560098 HOXA3O43365 443 aaPredicted RBP14.5□□□□□ -0.09
CRTC3-208ENST00000560098 DIRAS1O95057 198 aa14.5□□□□□ -0.09
CRTC3-208ENST00000560098 RENP00797 406 aa14.5□□□□□ -0.09
CRTC3-208ENST00000560098 MDKP21741 143 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms