RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 CTRB2Q6GPI1 263 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 APOBEC3HQ6NTF7 200 aaKnown RBP3.34□□□□□ -1.87
PABPN1-204ENST00000554062 ABHD13Q7L211 337 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 OAFQ86UD1 273 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 MREGQ8N565 214 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 OR4F15Q8NGB8 312 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 LINC01006Q8NI28 216 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 IMMP1LQ96LU5 166 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 TSSK3Q96PN8 268 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 CSPG4P5Q96PW8 444 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 RASL11BQ9BPW5 248 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 LINC00597Q9H2U6 94 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 PIGUQ9H490 435 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 EML4Q9HC35 981 aaKnown RBP3.34□□□□□ -1.87
PABPN1-204ENST00000554062 DYRK4Q9NR20 520 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 PTTG3PQ9NZH4 202 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 IFNKQ9P0W0 207 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 SIPA1L1O43166 1804 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 FOCADQ5VW36 1801 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 DOCK2Q92608 1830 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 GAKO14976 1311 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 MYH2Q9UKX2 1941 aa3.34□□□□□ -1.88
PABPN1-204ENST00000554062 REV3LO60673 3130 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 TDRD15B5MCY1 1934 aaKnown RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 ZNF816-ZNF321PA0A0X1KG74 233 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 GABRR3A8MPY1 467 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 SERPINE3A8MV23 424 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 NDUFS8O00217 210 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 RAD51CO43502 376 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 XRCC2O43543 280 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 AIREO43918 545 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 ICOSLGO75144 302 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 SUPT7LO94864 414 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 FARS2O95363 451 aaKnown RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 RAB3DO95716 219 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 LSM8O95777 96 aaKnown RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 AIFM1O95831 613 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 IFNW1P05000 195 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 CRYGCP07315 174 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 GIPP09681 153 aaPredicted RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 ZDHHC11BP0C7U3 371 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 CCDC172P0C7W6 258 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 IGHV3-43DP0DP04 118 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 GFAPP14136 432 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 MGMTP16455 207 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 CRISP2P16562 243 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 WARSP23381 471 aaKnown RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 BMI1P35226 326 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 OR1G1P47890 313 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 CSNK1DP48730 415 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 ETV1P50549 477 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 STX17P56962 302 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 SMARCB1Q12824 385 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 ILKQ13418 452 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 SGCAQ16586 387 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 DEFB115Q30KQ5 88 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 SOHLH1Q5JUK2 328 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 ANKRD22Q5VYY1 191 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 PRELID2Q8N945 189 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 GATSQ8NAP1 163 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 OR5B3Q8NH48 314 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 ECHDC3Q96DC8 303 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 SEH1LQ96EE3 360 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 API5Q9BZZ5 524 aaKnown RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 RPF2Q9H7B2 306 aaKnown RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 C8orf33Q9H7E9 229 aaPredicted RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 MMP26Q9NRE1 261 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 CLN6Q9NWW5 311 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 COMMD3-BMI1R4GMX3 469 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 PHLPP2Q6ZVD8 1323 aa3.33□□□□□ -1.88
PABPN1-204ENST00000554062 COL2A1P02458 1487 aaPredicted RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 RBBP6Q7Z6E9 1792 aaKnown RBP3.33□□□□□ -1.88
PABPN1-204ENST00000554062 CHD9Q3L8U1 2897 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 A0A0G2JLM5 398 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 A0A1B0GUH1 482 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 A0A1B0GVI7 797 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 TSPAN11A1L157 253 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 GJE1A6NN92 205 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 CENPXA8MT69 81 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 F6UB75 175 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 KRTAP4-16G5E9R7 235 aaPredicted RBP3.32□□□□□ -1.88
PABPN1-204ENST00000554062 BCKDKO14874 412 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 EMC8O43402 210 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 AQP8O94778 261 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 GAS8-AS1O95177 125 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 IGLV1-47P01700 117 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 ARG1P05089 322 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 IVLP07476 585 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 HOXB8P17481 243 aaPredicted RBP3.32□□□□□ -1.88
PABPN1-204ENST00000554062 SRMP19623 302 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 ZBTB25P24278 435 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 CASQ1P31415 396 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 WNT4P56705 351 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 DSCR10P59022 87 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 NUTF2P61970 127 aaKnown RBP3.32□□□□□ -1.88
PABPN1-204ENST00000554062 ZNF33AQ06730 810 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 FZD2Q14332 565 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 HNRNPA1L2Q32P51 320 aaKnown RBP3.32□□□□□ -1.88
PABPN1-204ENST00000554062 PAGE3Q5JUK9 113 aa3.32□□□□□ -1.88
PABPN1-204ENST00000554062 FHL5Q5TD97 284 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms