RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 ZSCAN2Q7Z7L9 614 aaPredicted RBP20.73■□□□□ 0.91
FOXA1-202ENST00000545425 ABCA7Q8IZY2 2146 aa20.73■□□□□ 0.91
FOXA1-202ENST00000545425 EIF4E3Q8N5X7 224 aaKnown RBP20.73■□□□□ 0.91
FOXA1-202ENST00000545425 CDCP1Q9H5V8 836 aa20.73■□□□□ 0.91
FOXA1-202ENST00000545425 FAM206AQ9NX38 181 aa20.73■□□□□ 0.91
FOXA1-202ENST00000545425 ZNF224Q9NZL3 707 aa20.73■□□□□ 0.91
FOXA1-202ENST00000545425 GLS2Q9UI32 602 aa20.73■□□□□ 0.91
FOXA1-202ENST00000545425 PLEKHA6Q9Y2H5 1048 aa20.73■□□□□ 0.91
FOXA1-202ENST00000545425 RHBDD3Q9Y3P4 386 aa20.73■□□□□ 0.91
FOXA1-202ENST00000545425 FXYD6-FXYD2A0A087WZ82 144 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 CPED1A4D0V7 1026 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 HEXBP07686 556 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 ZNF735P0CB33 412 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 UBBP0CG47 229 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 ZNF41P51814 821 aaPredicted RBP20.72■□□□□ 0.91
FOXA1-202ENST00000545425 RPS27AP62979 156 aaKnown RBP20.72■□□□□ 0.91
FOXA1-202ENST00000545425 UBA52P62987 128 aaKnown RBP20.72■□□□□ 0.91
FOXA1-202ENST00000545425 ZNF345Q14585 488 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 TMEM71Q6P5X7 295 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 PAPD4Q6PIY7 484 aaKnown RBP20.72■□□□□ 0.91
FOXA1-202ENST00000545425 ZNF813Q6ZN06 617 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 BPIFB2Q8N4F0 458 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 C5orf34Q96MH7 638 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 FXYD6Q9H0Q3 95 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 SMOC1Q9H4F8 434 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 NARFLQ9H6Q4 476 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 CTSFQ9UBX1 484 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 PILRBQ9UKJ0 227 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 SLC5A6Q9Y289 635 aa20.72■□□□□ 0.91
FOXA1-202ENST00000545425 A0A1B0GTI1 187 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 EIF1AYO14602 144 aaKnown RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 ALOX12BO75342 701 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 SLC25A4P12235 298 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 ENPP1P22413 925 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 EIF1AXP47813 144 aaKnown RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 POU3F1Q03052 451 aaPredicted RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 ZNF239Q16600 458 aaKnown RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 PRAMEF17Q5VTA0 474 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 ZNF529Q6P280 563 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 OR2W3Q7Z3T1 314 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 PRSS58Q8IYP2 241 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 OR5D14Q8NGL3 314 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 OR5M8Q8NGP6 311 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 OR8S1Q8NH09 359 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 FOXN4Q96NZ1 517 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 CGGBP1Q9UFW8 167 aaPredicted RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 GPN3Q9UHW5 284 aaPredicted RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 DCDC2BA2VCK2 349 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 BET1O15155 118 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 GDF9O60383 454 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 CHRM2P08172 466 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 NMBP08949 121 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 ACSM4P0C7M7 580 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 NR2C1P13056 603 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 HLA-DOBP13765 273 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 MGMTP16455 207 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 LAP3P28838 519 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 ZNF260Q3ZCT1 412 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 RNASE10Q5GAN6 216 aaKnown RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 PEAR1Q5VY43 1037 aaPredicted RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 OVCH2Q7RTZ1 564 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 HSD17B13Q7Z5P4 300 aaPredicted RBP20.71■□□□□ 0.91
FOXA1-202ENST00000545425 OR1M1Q8NGA1 313 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 PPP1R14AQ96A00 147 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 SLAMF6Q96DU3 332 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 WBP1Q96G27 269 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 MFFQ9GZY8 342 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 SLC25A32Q9H2D1 315 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 PPA2Q9H2U2 334 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 SDHAF2Q9NX18 166 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 EXPH5Q8NEV8 1989 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 PCDH15Q96QU1 1955 aa20.71■□□□□ 0.91
FOXA1-202ENST00000545425 C17orf51A8MQB3 221 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 SPOCK1Q08629 439 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 ATPAF1Q5TC12 328 aaPredicted RBP20.7■□□□□ 0.9
FOXA1-202ENST00000545425 TCEAL6Q6IPX3 200 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 CHMP1BQ7LBR1 199 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 SLC25A43Q8WUT9 341 aaPredicted RBP20.7■□□□□ 0.9
FOXA1-202ENST00000545425 TCEAL3Q969E4 200 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 MRPL13Q9BYD1 178 aaKnown RBP20.7■□□□□ 0.9
FOXA1-202ENST00000545425 REG4Q9BYZ8 158 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 SLC22A11Q9NSA0 550 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 PPP4R1LQ9P1A2 415 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 ADAMTS20P59510 1910 aa20.7■□□□□ 0.9
FOXA1-202ENST00000545425 DMXL1Q9Y485 3027 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 BCAT2O15382 392 aaPredicted RBP20.69■□□□□ 0.9
FOXA1-202ENST00000545425 RAD1O60671 282 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 OR2F2O95006 317 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 MPZL1O95297 269 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 WISP1O95388 367 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 RAB3AP20336 220 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 FBXW4P57775 412 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 OR2F1Q13607 317 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 TRIM61Q5EBN2 209 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 SLC23A3Q6PIS1 610 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 MDGA2Q7Z553 956 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 SLC25A42Q86VD7 318 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 PDZD9Q8IXQ8 264 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 OR51A2Q8NGJ7 313 aa20.69■□□□□ 0.9
FOXA1-202ENST00000545425 OR5M9Q8NGP3 310 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 1158.9 ms