RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, human

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-222	ENST00000543627	USP51	Q70EK9	711 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	HIST2H3A	Q71DI3	136 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	CXXC5	Q7LFL8	322 aa	Known RBP	9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	DPY19L4	Q7Z388	723 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	C1orf174	Q8IYL3	243 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF786	Q8N393	782 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF283	Q8N7M2	679 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF540	Q8NDQ6	660 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	BHLHE23	Q8NDY6	225 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	BBS1	Q8NFJ9	593 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	OR2Z1	Q8NG97	314 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	CCL17	Q92583	94 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	YIPF5	Q969M3	257 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	APOBEC3D	Q96AK3	386 aa	Predicted RBP	9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	SLAMF6	Q96DU3	332 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	COG8	Q96MW5	612 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	RAB3IP	Q96QF0	476 aa	Predicted RBP	9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	DCLRE1C	Q96SD1	692 aa	Known RBP	9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	PKP2	Q99959	881 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	SAP30L	Q9HAJ7	183 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	BRD7	Q9NPI1	651 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	DNAJC27	Q9NZQ0	273 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	KCNG2	Q9UJ96	466 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	PURG	Q9UJV8	347 aa	Known RBP	9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	OAZ3	Q9UMX2	235 aa		9.43	□□□□□ -0.9
DDB1-222	ENST00000543627	IGHV4-61	A0A0C4DH41	118 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	IGHV3-64D	A0A0J9YX35	117 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	ZSCAN5B	A6NJL1	495 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627		M0R129	80 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627		M0R135	149 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	NDUFS8	O00217	210 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	TLX2	O43763	284 aa	Predicted RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	SELENOF	O60613	162 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	ANXA2	P07355	339 aa	Known RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	MRPL3	P09001	348 aa	Known RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	ACSM4	P0C7M7	580 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	PSKH1	P11801	424 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	IGFBP5	P24593	272 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	BLVRA	P53004	296 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	HCCS	P53701	268 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	ACTR3	P61158	418 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	TNFAIP6	P98066	277 aa	Predicted RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	LOXL1	Q08397	574 aa	Predicted RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	TRIP10	Q15642	601 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	TMEM249	Q2WGJ8	235 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	PCGF3	Q3KNV8	242 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	TMEM255A	Q5JRV8	349 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	FAHD1	Q6P587	224 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	BCDIN3D	Q7Z5W3	292 aa	Known RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	TCEANC	Q8N8B7	351 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	DNAJC9	Q8WXX5	260 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF799	Q96GE5	643 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	CENPN	Q96H22	339 aa	Predicted RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF582	Q96NG8	517 aa	Predicted RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	IL4I1	Q96RQ9	567 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	NMNAT2	Q9BZQ4	307 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	EGLN1	Q9GZT9	426 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	CYSLTR2	Q9NS75	346 aa		9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF275	Q9NSD4	429 aa	Predicted RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	9.42	□□□□□ -0.9
DDB1-222	ENST00000543627	IGHV1-69-2	A0A0G2JMI3	117 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	H2BFM	P0C1H6	154 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	TNFSF4	P23510	183 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	EPHA2	P29317	976 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	RBMX	P38159	391 aa	Known RBP	9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	LIPA	P38571	399 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	MMP15	P51511	669 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	ESRRG	P62508	458 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	HNRNPA0	Q13151	305 aa	Known RBP	9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	RSPO1	Q2MKA7	263 aa	Predicted RBP	9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	HFE	Q30201	348 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	GFOD2	Q3B7J2	385 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	ZIK1	Q3SY52	487 aa	Predicted RBP	9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	LINC01590	Q5TEZ4	76 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	CYB5R2	Q6BCY4	276 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	PGAP1	Q75T13	922 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	SHF	Q7M4L6	423 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	MRPL21	Q7Z2W9	205 aa	Known RBP	9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	C10orf67	Q8IYJ2	551 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	OR10S1	Q8NGN2	331 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	SPRYD4	Q8WW59	207 aa	Predicted RBP	9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	HAVCR1	Q96D42	359 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	ELMOD3	Q96FG2	381 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	DUS3L	Q96G46	650 aa	Known RBP	9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	KCNJ15	Q99712	375 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	CIB1	Q99828	191 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	ABHD6	Q9BV23	337 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	TTTY10	Q9BZA0	68 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	PRRG3	Q9BZD7	231 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	CHODL	Q9H9P2	273 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	SLC25A19	Q9HC21	320 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	PNRC2	Q9NPJ4	139 aa	Known RBP	9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	ORC6	Q9Y5N6	252 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	CACNG2	Q9Y698	323 aa		9.41	□□□□□ -0.9
DDB1-222	ENST00000543627	LOC100289279	A0A1B0GTE1	492 aa		9.4	□□□□□ -0.9
DDB1-222	ENST00000543627	ISPD	A4D126	451 aa		9.4	□□□□□ -0.9
DDB1-222	ENST00000543627	GGT3P	A6NGU5	568 aa		9.4	□□□□□ -0.9
DDB1-222	ENST00000543627	VWC2L	B2RUY7	222 aa		9.4	□□□□□ -0.9
DDB1-222	ENST00000543627	ZNF878	C9JN71	531 aa		9.4	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms