RNA–Protein interactions for RNA: ENST00000518196.5

PABPC1-205, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-205ENST00000518196 ZNF254O75437 659 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 CCDC159P0C7I6 412 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 PIPP12273 146 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-205ENST00000518196 DCKP27707 260 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 LOXP28300 417 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-205ENST00000518196 PCSK6P29122 969 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 CALCRP30988 508 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 RAD52P43351 418 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 EGR3Q06889 387 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 LAIR2Q6ISS4 152 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF704Q6ZNC4 412 aaPredicted RBP11.23□□□□□ -0.61
PABPC1-205ENST00000518196 PLEKHG7Q6ZR37 379 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF679Q8IYX0 411 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 STX19Q8N4C7 294 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF283Q8N7M2 679 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 EDARADDQ8WWZ3 215 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 SLC7A6Q92536 515 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 C14orf79Q96F83 325 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 TMEM80Q96HE8 168 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 AMELYQ99218 206 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 MDFIQ99750 246 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 TMEM204Q9BSN7 226 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 NIPAL2Q9H841 368 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 INPP5EQ9NRR6 644 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 CHCHD3Q9NX63 227 aaKnown RBP11.23□□□□□ -0.61
PABPC1-205ENST00000518196 PSORS1C1Q9UIG5 152 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 BLOC1S6Q9UL45 172 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 KLHDC2Q9Y2U9 406 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 LRRC42Q9Y546 428 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 CADP27708 2225 aa11.23□□□□□ -0.61
PABPC1-205ENST00000518196 FAM221AA4D161 298 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 SHISA9B4DS77 424 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 ATP6V1G2-DDX39BF2Z307 99 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 J3QRE1 110 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 M0R135 149 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 CTAG2O75638 210 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 ABHD16AO95870 558 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 KRT8P05787 483 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 DBHP09172 617 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 NR4A1P22736 598 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 SSTR2P30874 369 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 OPRL1P41146 370 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 SLC6A9P48067 706 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 RGS6P49758 472 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 RIDAP52758 137 aaKnown RBP11.22□□□□□ -0.61
PABPC1-205ENST00000518196 ROM1Q03395 351 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 TLE4Q04727 773 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 SPOCK1Q08629 439 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 ST3GAL4Q11206 333 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 RBM48Q5RL73 367 aaKnown RBP11.22□□□□□ -0.61
PABPC1-205ENST00000518196 ADAM5Q6NVV9 412 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 LRRN1Q6UXK5 716 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 AHSA2Q719I0 299 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 KCTD20Q7Z5Y7 419 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 C1orf174Q8IYL3 243 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF786Q8N393 782 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 SNX33Q8WV41 574 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 MYDGFQ969H8 173 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 OR8B4Q96RC9 309 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 TTTY10Q9BZA0 68 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 BCL2L14Q9BZR8 327 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 SP140LQ9H930 580 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 SLCO1C1Q9NYB5 712 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 DIMT1Q9UNQ2 313 aaKnown RBP11.22□□□□□ -0.61
PABPC1-205ENST00000518196 MYRFQ9Y2G1 1151 aa11.22□□□□□ -0.61
PABPC1-205ENST00000518196 EXOSC1Q9Y3B2 195 aaKnown RBP11.22□□□□□ -0.61
PABPC1-205ENST00000518196 METTL15A6NJ78 407 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 PTGES3LE9PB15 166 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 PSMD9O00233 223 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 PLAUP00749 431 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 IGHA1P01876 353 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 TACSTD2P09758 323 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 ACSM4P0C7M7 580 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 MYL12AP19105 171 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 OTX1P32242 354 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-205ENST00000518196 CX3CR1P49238 355 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 PRKXP51817 358 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 UCP2P55851 309 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 RPS23P62266 143 aaKnown RBP11.21□□□□□ -0.61
PABPC1-205ENST00000518196 ACTA2P62736 377 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 ACTG2P63267 376 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 ZNF85Q03923 595 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 HGFACQ04756 655 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 SNTB2Q13425 540 aaKnown RBP11.21□□□□□ -0.61
PABPC1-205ENST00000518196 GALEQ14376 348 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 RSPO1Q2MKA7 263 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-205ENST00000518196 KRTAP27-1Q3LI81 207 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 DRAM2Q6UX65 266 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 SSX6Q7RTT6 188 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 FAM220AQ7Z4H9 259 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 LHFPL3Q86UP9 236 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 TMEM200AQ86VY9 491 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 PAQR4Q8N4S7 273 aaPredicted RBP11.21□□□□□ -0.61
PABPC1-205ENST00000518196 YIPF7Q8N8F6 280 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 NUP37Q8NFH4 326 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 KBTBD8Q8NFY9 601 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 OR5L1Q8NGL2 311 aa11.21□□□□□ -0.61
PABPC1-205ENST00000518196 COG8Q96MW5 612 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms