RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 LINC00173Q6ZV60 143 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 STRADAQ7RTN6 431 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 LRRC8AQ8IWT6 810 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 CEND1Q8N111 149 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 CD177Q8N6Q3 437 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 NPWQ8N729 165 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 WDR31Q8NA23 367 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 ZFP90Q8TF47 636 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 CCDC12Q8WUD4 166 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 TMEM239Q8WW34 195 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 MRGPRFQ96AM1 343 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 CREB3L1Q96BA8 519 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 GALNT14Q96FL9 552 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 BTN2A3PQ96KV6 586 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 UTP23Q9BRU9 249 aaKnown RBP2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 FRMD8P1Q9BZ68 369 aaPredicted RBP2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 PARP12Q9H0J9 701 aaKnown RBP2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 LINC00597Q9H2U6 94 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 REEP1Q9H902 201 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 VAPAQ9P0L0 249 aa2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 TRMT112Q9UI30 125 aaKnown RBP2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 MRPS18BQ9Y676 258 aaKnown RBP2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 BAZ1BQ9UIG0 1483 aaKnown RBP2.8□□□□□ -1.96
TRAPPC13-208ENST00000505553 FHOD3Q2V2M9 1422 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ARAP1Q96P48 1450 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 A0A1B0GW15 77 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ANKRD20A5PA0PJZ0 165 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 GOLGA8JA6NMD2 632 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 GJE1A6NN92 205 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ANKRD63C9JTQ0 380 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ALOX12BO75342 701 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 RDH16O75452 317 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 TRAPPC6AO75865 159 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 FADS2O95864 444 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 GLAP06280 429 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 EIF4EP06730 217 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 GNAO1P09471 354 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 GOLGA8HP0CJ92 632 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 PNMA6AP0CW24 399 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ERGP11308 486 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 PRPS2P11908 318 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CD1EP15812 388 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CRISP2P16562 243 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 TCP1P17987 556 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CNR1P21554 472 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 GATA2P23769 480 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ARL2P36404 184 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CEACAM3P40198 252 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CSNK1A1P48729 337 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 HERVK_113P61574 105 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 VSNL1P62760 191 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 TPM4P67936 248 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 RPL18AQ02543 176 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CPTPQ5TA50 214 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ERO1BQ86YB8 467 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ZFP41Q8N8Y5 198 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 C20orf203Q8NBC4 194 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ZNF485Q8NCK3 441 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 NPBQ8NG41 125 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 OR51G1Q8NGK1 321 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 OR10Z1Q8NGY1 313 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 OR6X1Q8NH79 312 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ACTRT1Q8TDG2 376 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 DNAJC19Q96DA6 116 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ZNF317Q96PQ6 595 aaPredicted RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 TSNAXQ99598 290 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 SLCO1B3Q9NPD5 702 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 ZNF226Q9NYT6 803 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 SLC25A37Q9NYZ2 338 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 SLC17A7Q9P2U7 560 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 STX18Q9P2W9 335 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CES1P1Q9UKY3 287 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 CFL2Q9Y281 166 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 F11RQ9Y624 299 aaKnown RBP2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 NFASCO94856 1347 aa2.79□□□□□ -1.96
TRAPPC13-208ENST00000505553 A0A0A6YYD5 115 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 IGLV1-36A0A0B4J1U3 117 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 CIB4A0PJX0 185 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 MGAT4DA6NG13 374 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 ERI2A8K979 691 aaKnown RBP2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 DFFAO00273 331 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 SLC16A7O60669 478 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 SC5DO75845 299 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 GCGP01275 180 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 FABP3P05413 133 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 TPM3P06753 285 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 PGA5P0DJD9 388 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 NQO2P16083 231 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 CEACAM6P40199 344 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 NCBP2P52298 156 aaKnown RBP eCLIP2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 NUP107P57740 925 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 OR2B8PP59922 312 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 LYZP61626 148 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 PPP1CBP62140 327 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 PAFAH1B2P68402 229 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 REG3AQ06141 175 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 SIGLEC14Q08ET2 396 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 TNXAQ16473 311 aa2.78□□□□□ -1.96
TRAPPC13-208ENST00000505553 NDUFAF6Q330K2 333 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms