RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 TBCCD1Q9NVR7 557 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 UPB1Q9UBR1 384 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 ING1Q9UK53 422 aaPredicted RBP9.05□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF175Q9Y473 711 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 LHFPL6Q9Y693 200 aa9.05□□□□□ -0.96
HDAC3-214ENST00000495485 PHF3Q92576 2039 aaKnown RBP9.04□□□□□ -0.96
HDAC3-214ENST00000495485 PTPN13Q12923 2485 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 TRBV5-7A0A0A0MS05 114 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 IFITM5A6NNB3 132 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 PRR32B1ATL7 298 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 NCR1O76036 304 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 PTTG1O95997 202 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 IGHG3P01860 377 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 YES1P07947 543 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 HOXD4P09016 255 aaPredicted RBP9.04□□□□□ -0.96
HDAC3-214ENST00000495485 FSTP19883 344 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 CTSSP25774 331 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 CDAP32320 146 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 RFC3P40938 356 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 KIR3DL2P43630 455 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 SOX2P48431 317 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 SELENOPP49908 381 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 CASP6P55212 293 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 TPTEP56180 551 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 CAV3P56539 151 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 PSMA6P60900 246 aaKnown RBP9.04□□□□□ -0.96
HDAC3-214ENST00000495485 RIN1Q13671 783 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 ELFN2Q5R3F8 820 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 FAM27D1Q5T7N8 215 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 TRIQKQ629K1 86 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 MTFR2Q6P444 385 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 DPPA2Q7Z7J5 298 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 LYSMD2Q8IV50 215 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 SIAH3Q8IW03 269 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 SERPINA12Q8IW75 414 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 ELMOD2Q8IZ81 293 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 PRSS35Q8N3Z0 413 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 NKAIN3Q8N8D7 197 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 SAMD12Q8N8I0 201 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 POC5Q8NA72 575 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 OR5D14Q8NGL3 314 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 OR13C5Q8NGS8 318 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 TRMT10AQ8TBZ6 339 aaKnown RBP9.04□□□□□ -0.96
HDAC3-214ENST00000495485 RAB40AQ8WXH6 277 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 PHF21AQ96BD5 680 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 TAAR6Q96RI8 345 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 AMELYQ99218 206 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 FOXB1Q99853 325 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 PBOV1Q9GZY1 135 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 HDHD2Q9H0R4 259 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 BCO1Q9HAY6 547 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 EMC7Q9NPA0 242 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 BRD7Q9NPI1 651 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 PLSCR2Q9NRY7 297 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 CYSLTR2Q9NS75 346 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 ASF1BQ9NVP2 202 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 ASH2LQ9UBL3 628 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 NUFIP1Q9UHK0 495 aaKnown RBP9.04□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF391Q9UJN7 358 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 AK6Q9Y3D8 172 aaKnown RBP9.04□□□□□ -0.96
HDAC3-214ENST00000495485 ETV7Q9Y603 341 aa9.04□□□□□ -0.96
HDAC3-214ENST00000495485 TENM4Q6N022 2769 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 USP9YO00507 2555 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-214ENST00000495485 A0A1B0GVC2 190 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 A0A1W2PPK0 400 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 SHISA3A0PJX4 238 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 SMIM30A4D0T7 59 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF587BE7ETH6 402 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 H0YC42 278 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 J3QKU1 62 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 MAGEB3O15480 346 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 SYT7O43581 403 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 HPGDSO60760 199 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 SRSF10O75494 262 aaKnown RBP9.03□□□□□ -0.96
HDAC3-214ENST00000495485 MTRF1O75570 445 aaKnown RBP9.03□□□□□ -0.96
HDAC3-214ENST00000495485 SLC2A2P11168 524 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF20P17024 532 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 PTGER4P35408 488 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 PITPNBP48739 271 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 TDGF1P3P51864 188 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 RAB35Q15286 201 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 CEP78Q5JTW2 689 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 UBE2NLQ5JXB2 153 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 PYHIN1Q6K0P9 492 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 MZT2BQ6NZ67 158 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 CNIH2Q6PI25 160 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 CORO6Q6QEF8 472 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 Q6ZNX1 250 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 DCDC5Q6ZRR9 648 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 PGAP1Q75T13 922 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 DOK3Q7L591 496 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 P4HA3Q7Z4N8 544 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 ZNF100Q8IYN0 542 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 CENPSQ8N2Z9 138 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 IL17RDQ8NFM7 739 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 HSD17B8Q92506 261 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 ITFG2Q969R8 447 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 RNF166Q96A37 237 aaPredicted RBP9.03□□□□□ -0.96
HDAC3-214ENST00000495485 APH1AQ96BI3 265 aa9.03□□□□□ -0.96
HDAC3-214ENST00000495485 PPP1R14BQ96C90 147 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms