RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 ONECUT1Q9UBC0 465 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 RNF7Q9UBF6 113 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 CTSZQ9UBR2 303 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 LGALS13Q9UHV8 139 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 ATPIF1Q9UII2 106 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 AURKCQ9UQB9 309 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 DNAH7Q8WXX0 4024 aa6.29□□□□□ -1.4
PDPN-205ENST00000487038 DNAH1Q9P2D7 4330 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 MEIOCA2RUB1 952 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 OOEPA6NGQ2 149 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 A6NIZ1 184 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 EVPLLA8MZ36 301 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 C3orf84H3BNL1 204 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 H3BUX3 64 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 LGALS8O00214 317 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 POLR3GO15318 223 aaPredicted RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 HDAC3O15379 428 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 OR10H3O60404 316 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 FAM20BO75063 409 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 PEX14O75381 377 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 DUS4LO95620 317 aaKnown RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 OPN1SWP03999 348 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 BGNP21810 368 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 CD200P41217 278 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 RBM34P42696 430 aaKnown RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 RAP1BP61224 184 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 STX1BP61266 288 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 RPL27P61353 136 aaKnown RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 RAP1AP62834 184 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 SLC35A2P78381 396 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 STX3Q13277 289 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 SFRP4Q6FHJ7 346 aaPredicted RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 PGBD2Q6P3X8 592 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 SLC2A7Q6PXP3 512 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 CALHM3Q86XJ0 350 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 LYG1Q8N1E2 194 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 OR51G2Q8NGK0 314 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 OR6T1Q8NGN1 323 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 SLC26A7Q8TE54 656 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 RASSF5Q8WWW0 418 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.28□□□□□ -1.4
PDPN-205ENST00000487038 DPF1Q92782 380 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 SGTBQ96EQ0 304 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 ECSITQ9BQ95 431 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 WFDC6Q9BQY6 131 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 WDR55Q9H6Y2 383 aaPredicted RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 CNTD2Q9H8S5 307 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 SMURF1Q9HCE7 757 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 MEPEQ9NQ76 525 aaPredicted RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 SIRT7Q9NRC8 400 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 SDR39U1Q9NRG7 319 aaPredicted RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 UFSP2Q9NUQ7 469 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 PNPOQ9NVS9 261 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 RPUSD1Q9UJJ7 312 aaKnown RBP6.28□□□□□ -1.4
PDPN-205ENST00000487038 SIGLEC9Q9Y336 463 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 MAB21L2Q9Y586 359 aa6.28□□□□□ -1.4
PDPN-205ENST00000487038 TENM2Q9NT68 2774 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 OR6C6A6NF89 314 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 DVL1O14640 695 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 UBDO15205 165 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 PPP1R3DO95685 299 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 THY1P04216 161 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 HLA-DPB1P04440 258 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 TSPAN19P0C672 248 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 PF4V1P10720 104 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 IGLL1P15814 213 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 FAHP16930 419 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 HOXB9P17482 250 aaPredicted RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 PAICSP22234 425 aaKnown RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 SAA4P35542 130 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 TAS2R41P59536 307 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 ACSM1Q08AH1 577 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 ECH1Q13011 328 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 MAB21L1Q13394 359 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 CLEC12AQ5QGZ9 265 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 BEND6Q5SZJ8 279 aaPredicted RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 LRIF1Q5T3J3 769 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 ZBTB37Q5TC79 503 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 PRAMEF6Q5VXH4 476 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 NCR3LG1Q68D85 454 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 BOLLQ8N9W6 283 aaKnown RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 PAPD5Q8NDF8 572 aaKnown RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 BEND2Q8NDZ0 799 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 OR9I1Q8NGQ6 314 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 OR1F12Q8NHA8 337 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 MOSPD2Q8NHP6 518 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 PFN4Q8NHR9 129 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 SLC7A13Q8TCU3 470 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 LIPHQ8WWY8 451 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 RCC1LQ96I51 464 aaKnown RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 SSX3Q99909 188 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 GPR61Q9BZJ8 451 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 ROPN1BQ9BZX4 212 aaPredicted RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 POLR2J2Q9GZM3 115 aaKnown RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 SLC22A4Q9H015 551 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 POLR2J3Q9H1A7 115 aaKnown RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 ROPN1Q9HAT0 212 aaPredicted RBP6.27□□□□□ -1.41
PDPN-205ENST00000487038 EMC7Q9NPA0 242 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 HIF3AQ9Y2N7 669 aa6.27□□□□□ -1.41
PDPN-205ENST00000487038 A0A1B0GWJ7 208 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms