RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	FGF20	Q9NP95	211 aa	Predicted RBP	11.32	□□□□□ -0.6
NR1H3-223	ENST00000486991	CNOT2	Q9NZN8	540 aa	Known RBP	11.32	□□□□□ -0.6
NR1H3-223	ENST00000486991	GDF2	Q9UK05	429 aa	Predicted RBP	11.32	□□□□□ -0.6
NR1H3-223	ENST00000486991	COPS3	Q9UNS2	423 aa		11.32	□□□□□ -0.6
NR1H3-223	ENST00000486991	MYRF	Q9Y2G1	1151 aa		11.32	□□□□□ -0.6
NR1H3-223	ENST00000486991	KLHDC2	Q9Y2U9	406 aa		11.32	□□□□□ -0.6
NR1H3-223	ENST00000486991	TIMM10B	Q9Y5J6	103 aa		11.32	□□□□□ -0.6
NR1H3-223	ENST00000486991	TMEM14A	Q9Y6G1	99 aa		11.32	□□□□□ -0.6
NR1H3-223	ENST00000486991	STAB1	Q9NY15	2570 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	DAPL1	A0PJW8	107 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	RER1	O15258	196 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	SGCE	O43556	437 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	LYN	P07948	512 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	MMP7	P09237	267 aa	Predicted RBP	11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	ALOX5AP	P20292	161 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	ARR3	P36575	388 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	CHN2	P52757	468 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	ACTC1	P68032	377 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	ACTA1	P68133	377 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	PSG4	Q00888	419 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	PLP2	Q04941	152 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	SPOCK1	Q08629	439 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	PCK2	Q16822	640 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	PABPC1L2A	Q5JQF8	200 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	ZNF774	Q6NX45	483 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	CFAP77	Q6ZQR2	320 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	SYT9	Q86SS6	491 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	RFLNB	Q8N5W9	214 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	ACBD7	Q8N6N7	88 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	AKR7L	Q8NHP1	331 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	SPATA3	Q8NHX4	192 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	SGCD	Q92629	289 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	MYDGF	Q969H8	173 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	SLAMF6	Q96DU3	332 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	MAP6	Q96JE9	813 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	AMELY	Q99218	206 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	MNT	Q99583	582 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	WAC	Q9BTA9	647 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	ABHD6	Q9BV23	337 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	YTHDF1	Q9BYJ9	559 aa	Known RBP	11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	OR2H1	Q9GZK4	316 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	WNT5B	Q9H1J7	359 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	MOV10	Q9HCE1	1003 aa	Known RBP	11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	OBP2B	Q9NPH6	170 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	CENPM	Q9NSP4	180 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	FKBP14	Q9NWM8	211 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	B3GNT2	Q9NY97	397 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	PLEK2	Q9NYT0	353 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	CISD1	Q9NZ45	108 aa	Known RBP	11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	ERVK-18	Q9QC07	812 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991	POU2F3	Q9UKI9	436 aa		11.31	□□□□□ -0.6
NR1H3-223	ENST00000486991		A0A1W2PQL4	384 aa	Predicted RBP	11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991		J3QRE1	110 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	OVOL3	O00110	214 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	ABCD4	O14678	606 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	PHYH	O14832	338 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	RGS10	O43665	173 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	DOK2	O60496	412 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	IGHA1	P01876	353 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	CDK1	P06493	297 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	DCK	P27707	260 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	HIST1H3A	P68431	136 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	SLC35A2	P78381	396 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	MVK	Q03426	396 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	RAB39A	Q14964	217 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	CCDC92	Q53HC0	331 aa	Predicted RBP	11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	HIST2H3PS2	Q5TEC6	136 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	AGAP6	Q5VW22	663 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	ZNF322	Q6U7Q0	402 aa	Predicted RBP	11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	HIST2H3A	Q71DI3	136 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	LHFPL3	Q86UP9	236 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	ALDH16A1	Q8IZ83	802 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	ST7L	Q8TDW4	575 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	ASB17	Q8WXJ9	295 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	REG4	Q9BYZ8	158 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	CCDC90B	Q9GZT6	254 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	DUSP21	Q9H596	190 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	CHCHD3	Q9NX63	227 aa	Known RBP	11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	IKZF2	Q9UKS7	526 aa		11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	DIMT1	Q9UNQ2	313 aa	Known RBP	11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	YLPM1	P49750	1951 aa	Known RBP	11.3	□□□□□ -0.6
NR1H3-223	ENST00000486991	IQCM	A0A1B0GVH7	501 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	PSMD9	O00233	223 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	MAGEB4	O15481	346 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	TNFAIP8	O95379	198 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	ADRA2A	P08913	450 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	BMP4	P12644	408 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	CBR1	P16152	277 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	MYL12A	P19105	171 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	C21orf33	P30042	268 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	HTR5A	P47898	357 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	ZNF83	P51522	516 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	IDH3G	P51553	393 aa	Predicted RBP	11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	GABARAPL2	P60520	117 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	ZNF85	Q03923	595 aa		11.29	□□□□□ -0.6
NR1H3-223	ENST00000486991	RAB35	Q15286	201 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms