RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CNTD2Q9H8S5 307 aa11.42□□□□□ -0.58
VPS52-218ENST00000482399 PLXNA2O75051 1894 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 LRP3O75074 770 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 CRYBA1P05813 215 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 SMIM10L1P0DMW3 83 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 PGCP20142 388 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 RAB13P51153 203 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 MEF2DQ14814 521 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 INPP5JQ15735 1006 aaPredicted RBP11.41□□□□□ -0.58
VPS52-218ENST00000482399 SGCAQ16586 387 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 AVPI1Q5T686 147 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 EEF1A1P5Q5VTE0 462 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 ETV3LQ6ZN32 361 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 SMIM10Q96HG1 83 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 SULT4A1Q9BR01 284 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 TNFSF18Q9UNG2 199 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 RPH3AQ9Y2J0 694 aaPredicted RBP11.41□□□□□ -0.58
VPS52-218ENST00000482399 TMED7-TICAM2A0A0A6YYA0 188 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 ARPC4-TTLL3A0A0A6YYG9 625 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 TRAV20A0A0B4J274 112 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 A0A1W2PP11 408 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 PHYHO14832 338 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 ACTL6AO96019 429 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 ABOP16442 354 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 CPT2P23786 658 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 GUCA1AP43080 201 aaPredicted RBP11.41□□□□□ -0.58
VPS52-218ENST00000482399 RPL27P61353 136 aaKnown RBP11.41□□□□□ -0.58
VPS52-218ENST00000482399 ZNF117Q03924 483 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 TLE3Q04726 772 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 EGR4Q05215 589 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 EGR3Q06889 387 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 ELAVL1Q15717 326 aaKnown RBP11.41□□□□□ -0.58
VPS52-218ENST00000482399 ADAM5Q6NVV9 412 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 ATG4DQ86TL0 474 aaPredicted RBP11.41□□□□□ -0.58
VPS52-218ENST00000482399 OR2I1PQ8NGU4 316 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 OR5H2Q8NGV7 314 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 NMNAT2Q9BZQ4 307 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 CHRDQ9H2X0 955 aa11.41□□□□□ -0.58
VPS52-218ENST00000482399 TRBV5-5A0A0J9YX44 114 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 A0A1W2PPC1 479 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 MEGF11A6BM72 1044 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 RAB5BP61020 215 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 ZNF141Q15928 474 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 TMEM229BQ8NBD8 167 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 OR13C8Q8NGS7 320 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 OR51E1Q8TCB6 317 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 NICN1Q9BSH3 213 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 GDE1Q9NZC3 331 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 OR2T1O43869 369 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 ZNF93P35789 620 aaPredicted RBP11.4□□□□□ -0.58
VPS52-218ENST00000482399 SLC25A1P53007 311 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 PRSS12P56730 875 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 FXYD4P59646 89 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 PRTGQ2VWP7 1150 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 GLIPR1L1Q6UWM5 242 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 BATF2Q8N1L9 274 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 ZNF283Q8N7M2 679 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 OR2AJ1Q8NGZ0 328 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 CTHRC1Q96CG8 243 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 AKR1E2Q96JD6 320 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 MRGPRX1Q96LB2 322 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 EHFQ9NZC4 300 aa11.4□□□□□ -0.58
VPS52-218ENST00000482399 MPTX1A8MV57 137 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 C1orf196B1AJZ1 125 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 SEMA4FO95754 770 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 IL11P20809 199 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 CD1CP29017 333 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 GPR85P60893 370 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 CCINQ13939 588 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 IGSF11Q5DX21 431 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 ZNF595Q8IYB9 648 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 BHLHE23Q8NDY6 225 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 OR5T2Q8NGG2 359 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 OR51F2Q8NH61 342 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 PMM1Q92871 262 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 LRFN5Q96NI6 719 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 FOXQ1Q9C009 403 aa11.4□□□□□ -0.59
VPS52-218ENST00000482399 RNF222A6NCQ9 220 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 ABHD16AO95870 558 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 ITGB2P05107 769 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 RCC1P18754 421 aaPredicted RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 SFTPDP35247 375 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 RBMXP38159 391 aaKnown RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 DHPSP49366 369 aaPredicted RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 DEFB133Q30KQ1 61 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 C1orf140Q5VVS0 124 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 ADAMTS18Q8TE60 1221 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 ZNF775Q96BV0 537 aaPredicted RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 RAB3CQ96E17 227 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 RSRP1Q9BUV0 290 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 RTN4RQ9BZR6 473 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 RGCCQ9H4X1 137 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 SCPEP1Q9HB40 452 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 RHOFQ9HBH0 211 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 PHF3Q92576 2039 aaKnown RBP11.39□□□□□ -0.59
VPS52-218ENST00000482399 TRAV36DV7A0A075B6V5 113 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 F5H5K5 113 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 TNFSF12O43508 249 aa11.39□□□□□ -0.59
VPS52-218ENST00000482399 NME2P1O60361 137 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms