RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 FGD2Q7Z6J4 655 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 SERPINA12Q8IW75 414 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 ESX1Q8N693 406 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 OR51D1Q8NGF3 324 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 CAPSLQ8WWF8 208 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 TMEM54Q969K7 222 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 RNF170Q96K19 258 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 DMRTB1Q96MA1 342 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 SF3B5Q9BWJ5 86 aaKnown RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 SPRY4Q9C004 299 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 PBOV1Q9GZY1 135 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 GHITMQ9H3K2 345 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 SEC61A2Q9H9S3 476 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 STMN3Q9NZ72 180 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 GLTPQ9NZD2 209 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 RCE1Q9Y256 329 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 LHFPL6Q9Y693 200 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 EML6Q6ZMW3 1958 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 TRAV6A0A075B6T7 132 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 CCDC187A0A096LP49 1063 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 A0A0A6YYJ9 748 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 A0A1B0GVI7 797 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 A8MV72 311 aaPredicted RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 ZNF814B7Z6K7 855 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 NPIPA2E9PIF3 369 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 NPIPA3F8WFD2 350 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 H0YC42 278 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 H7C417 338 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 RBBP9O75884 186 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 TTRP02766 147 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 MT-ND4P03905 459 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 ITGA5P08648 1049 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 QDPRP09417 244 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 ACSM4P0C7M7 580 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 GABRA1P14867 456 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 PSMB1P20618 241 aaKnown RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 CSNK1A1P48729 337 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 NKX2-5P52952 324 aaPredicted RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 SUCLG1P53597 346 aaKnown RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 CLDN17P56750 224 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 FOXK1P85037 733 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 TAF13Q15543 124 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 C2orf76Q3KRA6 126 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 TMEM164Q5U3C3 297 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 ADGRE4PQ86SQ3 457 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 NAXDQ8IW45 347 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 OR10S1Q8NGN2 331 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 PPP1R14AQ96A00 147 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 SLC25A28Q96A46 364 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 SORCS2Q96PQ0 1159 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 FYTTD1Q96QD9 318 aaKnown RBP9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 GPR87Q9BY21 358 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 OR51J1Q9H342 316 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 EMC7Q9NPA0 242 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 MCUBQ9NWR8 336 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 PTTG3PQ9NZH4 202 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 MTFP1Q9UDX5 166 aa9.29□□□□□ -0.92
POLR2J3-201ENST00000379340 PTPRQQ9UMZ3 2332 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 KIF26BQ2KJY2 2108 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 KIAA1549Q9HCM3 1950 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 TMEM272A0A1B0GTI8 110 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 CIB4A0PJX0 185 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 C21orf140B9A014 251 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 P2RY10O00398 339 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 EIF1AYO14602 144 aaKnown RBP9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 SYT7O43581 403 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 RAD1O60671 282 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 PEX14O75381 377 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 SCGNO76038 276 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 OPN1LWP04000 364 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 ERCC1P07992 297 aaPredicted RBP9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 RAB6AP20340 208 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 MSR1P21757 451 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 BDKRB2P30411 391 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 CDK10Q15131 360 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 GSG1Q2KHT4 349 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 CARD17Q5XLA6 110 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 CORO6Q6QEF8 472 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 CREB3L2Q70SY1 520 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 TIPARPQ7Z3E1 657 aaKnown RBP9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 LUZP2Q86TE4 346 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 CDH26Q8IXH8 852 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 PLPP7Q8NBV4 271 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 CCDC54Q8NEL0 328 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 OR6N1Q8NGY5 312 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 SLC39A7Q92504 469 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 JSRP1Q96MG2 331 aaPredicted RBP9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 GNRHR2Q96P88 292 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 CDC6Q99741 560 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 UTP23Q9BRU9 249 aaKnown RBP9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 C20orf85Q9H1P6 137 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 TP63Q9H3D4 680 aaPredicted RBP9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 NELFAQ9H3P2 528 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 SCPEP1Q9HB40 452 aa9.28□□□□□ -0.92
POLR2J3-201ENST00000379340 H3BSH0 61 aa9.27□□□□□ -0.93
POLR2J3-201ENST00000379340 LINC01387J3KSC0 135 aa9.27□□□□□ -0.93
POLR2J3-201ENST00000379340 LDLRAD4O15165 306 aa9.27□□□□□ -0.93
POLR2J3-201ENST00000379340 RAMP1O60894 148 aa9.27□□□□□ -0.93
POLR2J3-201ENST00000379340 TGM6O95932 706 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms