RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 MFFQ9GZY8 342 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 IL26Q9NPH9 171 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TAS2R8Q9NYW2 309 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TESMINQ9Y4I5 508 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TIMM9Q9Y5J7 89 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 FAM157AC9JC47 383 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 MPIG6BO95866 241 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 NPPAP01160 153 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 HIST1H1BP16401 226 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 G0S2P27469 103 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TAS2R20P59543 309 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 RPS18P62269 152 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 CSNK1G2P78368 415 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TRIM25Q14258 630 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 TGIF1Q15583 401 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 C3AR1Q16581 482 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 AGBL4Q5VU57 503 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 CARM1Q86X55 608 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 RNF113BQ8IZP6 322 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR10G2Q8NGC3 310 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR56B1Q8NGI3 324 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 FAM110DQ8TAY7 271 aaPredicted RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 ZNF519Q8TB69 540 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 CASTOR1Q8WTX7 329 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SECTM1Q8WVN6 248 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 FCGR1BQ92637 280 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TMEM18Q96B42 140 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR5M11Q96RB7 305 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SGPP1Q9BX95 441 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 MPC1Q9Y5U8 109 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 KIDINS220Q9ULH0 1771 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 GNG7O60262 68 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 B3GALNT1O75752 331 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 MC5RP33032 325 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 GMPRP36959 345 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 RBP2P50120 134 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SLC37A1P57057 533 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 XIAPP98170 497 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 MADCAM1Q13477 382 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 LAPTM4AQ15012 233 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ACTBL2Q562R1 376 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 GPR107Q5VW38 600 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 DESI1Q6ICB0 168 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 H2BFWTQ7Z2G1 175 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ANKRD37Q7Z713 158 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 TFAP2BQ92481 460 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 PINX1Q96BK5 328 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 ANKRD9Q96BM1 317 aaPredicted RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 Q96MF0 132 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 FAM208BQ5VWN6 2430 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 F5H697 171 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ADRA2AP08913 450 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ACHEP22303 614 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 BDKRB2P30411 391 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SELENOPP49908 381 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 HBG1P69891 147 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 HBG2P69892 147 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 DOK3Q7L591 496 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 COMMD6Q7Z4G1 85 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SYT8Q8NBV8 401 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 LINC01560Q8TB33 94 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 LRRC29Q8WV35 223 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 TREX2Q9BQ50 279 aaPredicted RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 SLC17A7Q9P2U7 560 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 PLCE1Q9P212 2302 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 MED19A0JLT2 244 aaPredicted RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 CDRT15L2A8MXV6 281 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 BOLA2-SMG1P6H3BVE0 249 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 PHF1O43189 567 aaPredicted RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 LANCL1O43813 399 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 NOBOXO60393 691 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 C9P02748 559 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 HPNP05981 417 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 HMGA1P17096 107 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 TAGLN2P37802 199 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 CA7P43166 264 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR1E2P47887 323 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 BTG2P78543 158 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ROM1Q03395 351 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SCGB2B2Q4G0G5 96 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 YIF1BQ5BJH7 314 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ADAM5Q6NVV9 412 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 PLET1Q6UQ28 207 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 LYSMD2Q8IV50 215 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 GTPBP8Q8N3Z3 284 aaPredicted RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 PLPP7Q8NBV4 271 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 NETO2Q8NC67 525 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 DUSP18Q8NEJ0 188 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR10D3Q8NH80 312 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 OR1L3Q8NH93 324 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 SNED1Q8TER0 1413 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 PELI1Q96FA3 418 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 PRRC1Q96M27 445 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 RPP25Q9BUL9 199 aaKnown RBP3.67□□□□□ -1.82
USH2A-202ENST00000366942 SLC25A31Q9H0C2 315 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 DUSP22Q9NRW4 184 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 ACER3Q9NUN7 267 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 IL36GQ9NZH8 169 aa3.67□□□□□ -1.82
USH2A-202ENST00000366942 UBQLN2Q9UHD9 624 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms