RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 IL24Q13007 206 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 KCNJ11Q14654 390 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 UFSP1Q6NVU6 142 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 BZW1Q7L1Q6 419 aaKnown RBP4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 VN1R4Q7Z5H5 301 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 PAQR7Q86WK9 346 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 CRLF3Q8IUI8 442 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 C9orf40Q8IXQ3 194 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 ANKFN1Q8N957 763 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 TTC29Q8NA56 475 aaPredicted RBP4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 STXBP6Q8NFX7 210 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR52K1Q8NGK4 314 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 LILRB4Q8NHJ6 448 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 TRUB1Q8WWH5 349 aaKnown RBP4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 IL1F10Q8WWZ1 152 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 CCT8L2Q96SF2 557 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 DPH7Q9BTV6 452 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 VPS37BQ9H9H4 285 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 NHEJ1Q9H9Q4 299 aaPredicted RBP4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 IFNKQ9P0W0 207 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 EXTL2Q9UBQ6 330 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 LCMT1Q9UIC8 334 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 OARD1Q9Y530 152 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 MAD1L1Q9Y6D9 718 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 HRNRQ86YZ3 2850 aaPredicted RBP4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 ZGRF1Q86YA3 2104 aa4.24□□□□□ -1.73
RNU4-39P-201ENST00000362455 C15orf38-AP3S2A0A0A6YYH1 394 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 CTAGE15A4D2H0 777 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 GABRR3A8MPY1 467 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 E9PLD3 99 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 SPOPO43791 374 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 CTAG2O75638 210 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 CA1P00915 261 aaPredicted RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR56A5P0C7T3 313 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 ICAM2P13598 275 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 IGHV1-2P23083 117 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 CXCR2P25025 360 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 RFC3P40938 356 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 XCR1P46094 333 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 HADHBP55084 474 aaKnown RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 EIF3EP60228 445 aaKnown RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 CXCL6P80162 114 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 RIPPLY1Q0D2K3 151 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 SERTAD2Q14140 314 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 LAGE3Q14657 143 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 KCTD19Q17RG1 926 aaPredicted RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 Q1RN00 199 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 C15orf32Q32M92 178 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 TIGITQ495A1 244 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 CTSL3PQ5NE16 218 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 RNLSQ5VYX0 342 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 SLC25A25Q6KCM7 469 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 FAHD2BQ6P2I3 314 aaPredicted RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 KCNIP4Q6PIL6 250 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 CTAGE6Q86UF2 777 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 MYPOPQ86VE0 399 aaPredicted RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 SLC38A6Q8IZM9 456 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 KIF2BQ8N4N8 673 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 SYT14Q8NB59 555 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR8K1Q8NGG5 319 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 TRMT10AQ8TBZ6 339 aaKnown RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 AENQ8WTP8 325 aaKnown RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 CA5BP1Q8WTZ4 195 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 ASZ1Q8WWH4 475 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 TSLPQ969D9 159 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 FAHD2AQ96GK7 314 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 AMDHD1Q96NU7 426 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 BIRC8Q96P09 236 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 FOXC2Q99958 501 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 TRIM45Q9H8W5 580 aaPredicted RBP4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 RAB18Q9NP72 206 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 MIEF1Q9NQG6 463 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 ABCA4P78363 2273 aa4.23□□□□□ -1.73
RNU4-39P-201ENST00000362455 ZANQ9Y493 2812 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 A0A1W2PNV4 684 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 PINLYPA6NC86 204 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 H3BMQ9 156 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 FCN1O00602 326 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 HAT1O14929 419 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 RIPK2O43353 540 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 TPST2O60704 377 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 TSC22D2O75157 780 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 DUSP14O95147 198 aaKnown RBP4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 ABOP16442 354 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 NUP107P57740 925 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 PRDX1Q06830 199 aaKnown RBP4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 RAB40BQ12829 278 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 FAM53BQ14153 422 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 PRPSAP1Q14558 356 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 NDUFA9Q16795 377 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 GLYR1Q49A26 553 aaPredicted RBP4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 LRRC23Q53EV4 343 aaPredicted RBP4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 SFT2D3Q587I9 215 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 SPATA46Q5T0L3 261 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 FAM71F2Q6NXP2 309 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 WFDC11Q8NEX6 87 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR5T3Q8NGG3 340 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR5L2Q8NGL0 311 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 OR51Q1Q8NH59 317 aa4.22□□□□□ -1.73
RNU4-39P-201ENST00000362455 FAM57AQ8TBR7 257 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms