RNA–Protein interactions for RNA: ENST00000359947.8

PTPRF-201, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best) BASIC

Gene PTPRF, Length 7,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-201ENST00000359947 DIMT1Q9UNQ2 313 aaKnown RBP14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SPANXN5Q5MJ07 72 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 MDGA2Q7Z553 956 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 LSRQ86X29 649 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SFTPA1Q8IWL2 248 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 MAST2Q6P0Q8 1798 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 ALOX5APP20292 161 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 TMEM230Q96A57 120 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 GALR2O43603 387 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-201ENST00000359947 GNG10P50151 68 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 ETV1P50549 477 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SPINK14Q6IE38 97 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 ZNF2Q9BSG1 426 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-201ENST00000359947 ZCCHC4Q9H5U6 513 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 CPNE5Q9HCH3 593 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 TREM2Q9NZC2 230 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SMLR1H3BR10 107 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SPRY1O43609 319 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SIX6O95475 246 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 THBS1P07996 1170 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SBK2P0C263 348 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 BSGP35613 385 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 FUNDC1Q8IVP5 155 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 CADM4Q8NFZ8 388 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 PLA2G12AQ9BZM1 189 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 CHST6Q9GZX3 395 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 FAM212BQ9NTI7 297 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-201ENST00000359947 PCYT1BQ9Y5K3 369 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-201ENST00000359947 MTNR1BP49286 362 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 RAB35Q15286 201 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 TAF9Q16594 264 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 SLC25A26Q70HW3 274 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 OR1L3Q8NH93 324 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 UBTD1Q9HAC8 227 aa14.12□□□□□ -0.15
PTPRF-201ENST00000359947 LAMA4Q16363 1823 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 RPS10-NUDT3A0A1W2PQS6 291 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 PRSS37A4D1T9 235 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 ZDHHC11BP0C7U3 371 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 APEX1P27695 318 aaKnown RBP14.11□□□□□ -0.15
PTPRF-201ENST00000359947 RPS10P46783 165 aaKnown RBP14.11□□□□□ -0.15
PTPRF-201ENST00000359947 PKD1L3Q7Z443 1732 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 OR2AE1Q8NHA4 323 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 NUDT9Q9BW91 350 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 TCRBV5S1A1TA0A578 114 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 LRRC10Q5BKY1 277 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 C16orf47Q6ZP98 133 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-201ENST00000359947 FN3KRPQ9HA64 309 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 SPAARA0A1B0GVQ0 90 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 PNLIPRP2P54317 469 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 ZNF121P58317 390 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-201ENST00000359947 RAP2BP61225 183 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 OR13C5Q8NGS8 318 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 CHST2Q9Y4C5 530 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 TRIP11Q15643 1979 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 A0A1W2PRD5 423 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 A0A1W2PRF3 423 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 A0A1W2PRM7 423 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 LYZL6O75951 148 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 PSMB1P20618 241 aaKnown RBP14.11□□□□□ -0.15
PTPRF-201ENST00000359947 FCRL6Q6DN72 434 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 OR51S1Q8NGJ8 323 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 UBALD1Q8TB05 177 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 ISYNA1Q9NPH2 558 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 M0QZ24 198 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 FABP1P07148 127 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 COL9A1P20849 921 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 DTYMKP23919 212 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 OR2A2Q6IF42 318 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 OR2A1Q8NGT9 310 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 LYSMD1Q96S90 227 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 CEPT1Q9Y6K0 416 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 TPRP12270 2363 aaKnown RBP14.11□□□□□ -0.15
PTPRF-201ENST00000359947 IGHV1OR15-9A0A0B4J2B8 117 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 KIR2DS1A0A191URI9 304 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 AQP7P3A6NL99 342 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 NUDT19A8MXV4 375 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 KIR2DS4P43632 304 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 KIR2DS1Q14954 304 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 SHBQ15464 509 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 FAM109AQ8N4B1 249 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 ESRP2Q9H6T0 727 aaKnown RBP14.11□□□□□ -0.15
PTPRF-201ENST00000359947 ETV7Q9Y603 341 aa14.11□□□□□ -0.15
PTPRF-201ENST00000359947 DDX60LQ5H9U9 1706 aaKnown RBP14.1□□□□□ -0.15
PTPRF-201ENST00000359947 ABCD3P28288 659 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 RAB1AP62820 205 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 TMEM174Q8WUU8 243 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 COMMD5Q9GZQ3 224 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 PBOV1Q9GZY1 135 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 CBR1P16152 277 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 GPX2P18283 190 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 P2RX3P56373 397 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 HTR4Q13639 388 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 PRSS35Q8N3Z0 413 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 ARPC5LQ9BPX5 153 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 ACHEP22303 614 aa14.1□□□□□ -0.15
PTPRF-201ENST00000359947 RPS27AP62979 156 aaKnown RBP14.1□□□□□ -0.15
PTPRF-201ENST00000359947 UBA52P62987 128 aaKnown RBP14.1□□□□□ -0.15
PTPRF-201ENST00000359947 ZNF816Q0VGE8 651 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-201ENST00000359947 OTUD1Q5VV17 481 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-201ENST00000359947 CMTM4Q8IZR5 234 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms