RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 UBL3O95164 117 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 DUSP1P28562 367 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 SLC5A2P31639 672 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 ETV1P50549 477 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 WDR74Q6RFH5 385 aaPredicted RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 EXD3Q8N9H8 876 aa11.05□□□□□ -0.64
PCF11-201ENST00000298281 PACRGQ96M98 296 aaPredicted RBP11.05□□□□□ -0.64
PCF11-201ENST00000298281 C5orf49A4QMS7 147 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 MT-ATP6P00846 226 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 RPL30P62888 115 aaKnown RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 ACSM6Q6P461 480 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 ADAMTSL4Q6UY14 1074 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 MRPL13Q9BYD1 178 aaKnown RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 TAS2R5Q9NYW4 299 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 DOCK11Q5JSL3 2073 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 TLCD2A6NGC4 264 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 K7EQS6 105 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 MGPP08493 103 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 SORBS1Q9BX66 1292 aaKnown RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 PROCRQ9UNN8 238 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 SLC5A6Q9Y289 635 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 CST5P28325 142 aaPredicted RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 MTNR1BP49286 362 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 PPIAP62937 165 aaKnown RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 ENDOGQ14249 297 aaKnown RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 SYPL1Q16563 259 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 SLC35D3Q5M8T2 416 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 TBPL2Q6SJ96 375 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 LINC00346Q8IVM7 164 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 OR5D13Q8NGL4 314 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 GRAMD2BQ96HH9 432 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 A0A1B0GTW7 788 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 CDRT15L2A8MXV6 281 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 SLC17A1Q14916 467 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 ZMAT3Q9HA38 289 aaKnown RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 ZNF324O75467 553 aaPredicted RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 MMP7P09237 267 aaPredicted RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 FGF7P21781 194 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 GABRB3P28472 473 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 ADPRHP54922 357 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 HERVK_113P61574 105 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 HDAC8Q9BY41 377 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 WASHC3Q9Y3C0 194 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 ZNF93P35789 620 aaPredicted RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 TFAP2EQ6VUC0 442 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 B3GNT8Q7Z7M8 397 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 ZFP62Q8NB50 900 aaPredicted RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 RHOXF1Q8NHV9 184 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 RPUSD4Q96CM3 377 aaKnown RBP11.04□□□□□ -0.64
PCF11-201ENST00000298281 NPAP1Q9NZP6 1156 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 ADAMTS5Q9UNA0 930 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 AMDHD2Q9Y303 409 aa11.04□□□□□ -0.64
PCF11-201ENST00000298281 KIR2DL1P43626 348 aaPredicted RBP11.03□□□□□ -0.64
PCF11-201ENST00000298281 KIR2DL2P43627 348 aaPredicted RBP11.03□□□□□ -0.64
PCF11-201ENST00000298281 RNF141Q8WVD5 230 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 CRLF2Q9HC73 371 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 RAB22AQ9UL26 194 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 NUP188Q5SRE5 1749 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 SIRPB1O00241 398 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 NME2P1O60361 137 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 ANKRD34CP0C6C1 535 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 OPRK1P41145 380 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 MDGA2Q7Z553 956 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 ARL6IP6Q8N6S5 226 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 ROBO4Q8WZ75 1007 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 FAM131CQ96AQ9 280 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 SEC22CQ9BRL7 303 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 MKRN2Q9H000 416 aaKnown RBP11.03□□□□□ -0.64
PCF11-201ENST00000298281 LHX3Q9UBR4 397 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 CACNA1SQ13698 1873 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 MKRN2OSH3BPM6 223 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 SLC35E2P0CK97 266 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 ADRA1AP35348 466 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 ZNF816Q0VGE8 651 aaPredicted RBP11.03□□□□□ -0.64
PCF11-201ENST00000298281 KLRB1Q12918 225 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 SIGIRRQ6IA17 410 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 VN1R2Q8NFZ6 395 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 DVL3Q92997 716 aaPredicted RBP11.03□□□□□ -0.64
PCF11-201ENST00000298281 TMEM106AQ96A25 262 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 SLC35A4Q96G79 324 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 POM121L2Q96KW2 1035 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 IP6K3Q96PC2 410 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 HAPLN2Q9GZV7 340 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 MED20Q9H944 212 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 HCRTR1O43613 425 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 TBX19O60806 448 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 T-ENOLP0DO92 83 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 SLC25A4P12235 298 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 PVRP15151 417 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 PRSS3P2Q8NHM4 247 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 VAMP8Q9BV40 100 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 PPT2Q9UMR5 302 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 KCPQ6ZWJ8 1503 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 TMEM72A0PK05 275 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 H7C2G1 150 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 CD14P08571 375 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 IAPPP10997 89 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 RAB1AP62820 205 aa11.03□□□□□ -0.64
PCF11-201ENST00000298281 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.644e-6■■□□□ 11.4
PCF11-201ENST00000298281 C19orf54Q5BKX5 351 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms