RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm20715E9Q3L7 95 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r139E9Q8L6 297 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r112G3UY48 297 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r135K9J7G0 307 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r125L7N227 307 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r116L7N2A6 307 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr13P34984 310 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tle3Q08122 772 aaKnown RBP14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Q8C784 167 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr812Q8VG64 310 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Elovl7Q9D2Y9 281 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 OcstampQ9D611 498 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r100Q9EPS5 307 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Jmjd6Q9ERI5 403 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr1162Q7TR28 314 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm9938Q8C3P5 112 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr763Q8VGC1 309 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr656Q8VGX9 329 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ubl7Q91W67 380 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Hemk1Q921L7 340 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dnttip1Q99LB0 328 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dnaja3Q99M87 480 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Exo1Q9QZ11 837 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Nprl2Q9WUE4 380 aa14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Arid1aA2BH40 2283 aaKnown RBP14.22□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Trbv21A0A0A6YX06 97 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Amy2a1E9PV85 245 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Zfp97E9PZP6 546 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 8030474K03RikE9Q4Y8 554 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Zfp960L7N267 546 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Foxd2O35392 492 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Amy2P00688 508 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tpi1P17751 299 aaKnown RBP14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Elavl1P70372 326 aaKnown RBP14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Zp3rQ60736 579 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Adam9Q61072 845 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Opn5Q6VZZ7 377 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 B630019K06RikQ7TNS5 333 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Glcci1Q8K3I9 537 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Vmn1r220Q8R272 298 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Egln2Q91YE2 419 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ccnl2Q9JJA7 518 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cd300cA2A7V7 229 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Zfp982A2A8Q4 368 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm10112D3YWP5 117 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Olfr419E9Q0Y7 313 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tgfb1P04202 390 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Eef1a1P10126 462 aaKnown RBP14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dpp4P28843 760 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Rab6aP35279 208 aaKnown RBP14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Kiaa1456Q80WQ4 447 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Foxo1Q9R1E0 652 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Fabp2P55050 132 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Hoxd1Q01822 328 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Prss27Q8BJR6 328 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Gm9999Q8C5Y2 53 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Cdca3Q99M54 266 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Trappc2Q9CQP2 140 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Dnmt3lQ9CWR8 421 aaKnown RBP14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 AhspQ9CY02 102 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Tmem30cQ9D4D7 342 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Aloxe3Q9WV07 711 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Ppp1r17Q9Z2E4 159 aa14.21□□□□□ -0.13
Ccdc88b-201ENSMUST00000113440 Htra4A2RT60 483 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r124D3YTX4 307 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm5901D3YVJ1 333 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm45062E0CZ38 131 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gpld1O70362 837 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Csn2P10598 231 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 MakQ04859 622 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Med16Q6PGF3 828 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 IfnkQ7TSL0 199 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zer1Q80ZJ6 779 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ablim2Q8BL65 612 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ndufb7Q9CR61 137 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ap1s2Q9DB50 160 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc35a2Q9R0M8 390 aa14.21□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 TrdcA0A0G2JEU3 153 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Nkx6-2D3Z4R4 277 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Lin7bO88951 207 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Il10P18893 178 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tmprss9P69525 1065 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Rps27Q6ZWU9 84 aaKnown RBP14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 HeltQ7TS99 240 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Crb2Q80YA8 1282 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Yipf6Q8BR70 236 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tctn1Q8BZ64 593 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Duoxa1Q8VE49 341 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fgf20Q9ESL9 211 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 A0A1Y7VIT9 351 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn2r113E9PZA6 856 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Idh3gP70404 393 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 MffQ6PCP5 291 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zbtb42Q811H0 420 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Abhd17cQ8VCV1 320 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr777Q8VFH3 311 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ceacam2Q925P2 520 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Emc9Q9DB76 206 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 TrilQ9DBY4 809 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Scn5aQ9JJV9 2019 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 118.5 ms