RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 RNF115Q9Y4L5 304 aa16.14■□□□□ 0.18
PNKP-224ENST00000631020 SGCEO43556 437 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 APOL3O95236 402 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 APEX1P27695 318 aaKnown RBP16.14■□□□□ 0.17
PNKP-224ENST00000631020 SCRN3Q0VDG4 424 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 TMED1Q13445 227 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 C3orf36Q3SXR2 165 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 VASH1Q7L8A9 365 aaPredicted RBP16.14■□□□□ 0.17
PNKP-224ENST00000631020 SLC16A9Q7RTY1 509 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 GJC3Q8NFK1 279 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 OR2AJ1Q8NGZ0 328 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 TMEM171Q8WVE6 324 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 Q96MT0 163 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 AMELYQ99218 206 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 MRPS26Q9BYN8 205 aaKnown RBP16.14■□□□□ 0.17
PNKP-224ENST00000631020 PNRC2Q9NPJ4 139 aaKnown RBP16.14■□□□□ 0.17
PNKP-224ENST00000631020 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.14■□□□□ 0.17
PNKP-224ENST00000631020 KLHDC2Q9Y2U9 406 aa16.14■□□□□ 0.17
PNKP-224ENST00000631020 PLAUP00749 431 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 CD3EP07766 207 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 SBK2P0C263 348 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 MYF6P23409 242 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 CD40P25942 277 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 MTNR1AP48039 350 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 BSPH1Q075Z2 132 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 SHFQ7M4L6 423 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 DCXRQ7Z4W1 244 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 OR51G2Q8NGK0 314 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 OTOSQ8NHW6 89 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 ST7LQ8TDW4 575 aa16.13■□□□□ 0.17
PNKP-224ENST00000631020 MOV10Q9HCE1 1003 aaKnown RBP16.13■□□□□ 0.17
PNKP-224ENST00000631020 ZNF701Q9NV72 531 aaPredicted RBP16.13■□□□□ 0.17
PNKP-224ENST00000631020 LOC100509620A0A075B734 347 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 SYNGR3O43761 229 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 DBTP11182 482 aaKnown RBP16.12■□□□□ 0.17
PNKP-224ENST00000631020 CCL2P13500 99 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 PLP2Q04941 152 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 ZNF91Q05481 1191 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 SPOCK1Q08629 439 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 RSPO1Q2MKA7 263 aaPredicted RBP16.12■□□□□ 0.17
PNKP-224ENST00000631020 TMEM108Q6UXF1 575 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 OR4F15Q8NGB8 312 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 AKAP1Q92667 903 aaKnown RBP eCLIP16.12■□□□□ 0.17
PNKP-224ENST00000631020 RNFT2Q96EX2 444 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 CNN2Q99439 309 aaKnown RBP16.12■□□□□ 0.17
PNKP-224ENST00000631020 ABHD6Q9BV23 337 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 ZNF696Q9H7X3 374 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 PLEK2Q9NYT0 353 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 PCDHGB5Q9Y5G0 923 aa16.12■□□□□ 0.17
PNKP-224ENST00000631020 HEATR1Q9H583 2144 aaKnown RBP16.12■□□□□ 0.17
PNKP-224ENST00000631020 OR6C6A6NF89 314 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 DOK2O60496 412 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 ALOX5APP20292 161 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 PTAFRP25105 342 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 CALCRP30988 508 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 NAAAQ02083 359 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 EIF2B1Q14232 305 aaKnown RBP16.11■□□□□ 0.17
PNKP-224ENST00000631020 KRTAP21-3Q3LHN1 58 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 ELFN2Q5R3F8 820 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 ALDH16A1Q8IZ83 802 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 PAQR4Q8N4S7 273 aaPredicted RBP16.11■□□□□ 0.17
PNKP-224ENST00000631020 SLC7A6Q92536 515 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 FBXW5Q969U6 566 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 LGALS12Q96DT0 336 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 POM121L2Q96KW2 1035 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 CNBD2Q96M20 576 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 C1orf198Q9H425 327 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 COPS3Q9UNS2 423 aa16.11■□□□□ 0.17
PNKP-224ENST00000631020 IQCMA0A1B0GVH7 501 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 SNTNA6NMZ2 147 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 J3QRE1 110 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 INHBBP09529 407 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 ZNF35P13682 527 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 STOMP27105 288 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 PTH2RP49190 550 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 RAB35Q15286 201 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 SLC35F2Q8IXU6 374 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 RFLNBQ8N5W9 214 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 SLC30A7Q8NEW0 376 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 OR1F12Q8NHA8 337 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 LILRB1Q8NHL6 650 aaPredicted RBP16.1■□□□□ 0.17
PNKP-224ENST00000631020 THEM6Q8WUY1 208 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 PERPQ96FX8 193 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 MRPS18AQ9NVS2 196 aaKnown RBP16.1■□□□□ 0.17
PNKP-224ENST00000631020 FBXL3Q9UKT7 428 aa16.1■□□□□ 0.17
PNKP-224ENST00000631020 EXOGQ9Y2C4 368 aaKnown RBP16.1■□□□□ 0.17
PNKP-224ENST00000631020 RPL36Q9Y3U8 105 aaKnown RBP16.1■□□□□ 0.17
PNKP-224ENST00000631020 NSD1Q96L73 2696 aaPredicted RBP16.1■□□□□ 0.17
PNKP-224ENST00000631020 IGHV2OR16-5A0A0B4J2B6 119 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 PRR32B1ATL7 298 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 ABCD4O14678 606 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 DBHP09172 617 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 COX5BP10606 129 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 SLC15A1P46059 708 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 RPL5P46777 297 aaKnown RBP16.09■□□□□ 0.17
PNKP-224ENST00000631020 HTR5AP47898 357 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 POU4F2Q12837 409 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 ZNF672Q499Z4 452 aaPredicted RBP16.09■□□□□ 0.17
PNKP-224ENST00000631020 SPATC1Q76KD6 591 aa16.09■□□□□ 0.17
PNKP-224ENST00000631020 ZNF454Q8N9F8 522 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms