RNA–Protein interactions for RNA: ENST00000625891.2

NRXN1-223, Transcript of neurexin 1, human

TSL 4 BASIC

Gene NRXN1, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-223	ENST00000625891	STRADA	Q7RTN6	431 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	PHF13	Q86YI8	300 aa	Predicted RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	C9orf40	Q8IXQ3	194 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	UMODL1-AS1	Q8N2C9	162 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	BBOF1	Q8ND07	529 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	OR4C5	Q8NGB2	326 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	SLC37A2	Q8TED4	501 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	ITLN1	Q8WWA0	313 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	PIH1D2	Q8WWB5	315 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	RASL10A	Q92737	203 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	NAT6	Q93015	286 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	NTAN1	Q96AB6	310 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	TSNARE1	Q96NA8	513 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	CHP1	Q99653	195 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	KRTAP4-3	Q9BYR4	195 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	CLSTN2	Q9H4D0	955 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	DHX35	Q9H5Z1	703 aa	Known RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	NEK6	Q9HC98	313 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	NT5M	Q9NPB1	228 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	ADAM22	Q9P0K1	906 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	WARS2	Q9UGM6	360 aa	Known RBP	4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	TMCO1	Q9UM00	188 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	TP53TG5	Q9Y2B4	290 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	PEX16	Q9Y5Y5	336 aa		4.38	□□□□□ -1.71
NRXN1-223	ENST00000625891	SPTAN1	Q13813	2472 aa	Known RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	PDZD2	O15018	2839 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	SIGLEC16	A6NMB1	481 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	SHISA9	B4DS77	424 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	TCP11X1	B4DZS4	312 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	SULT2B1	O00204	365 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	LIN7A	O14910	233 aa	Predicted RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	HCN1	O60741	890 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ATP5L	O75964	103 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	SLC2A10	O95528	541 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	LALBA	P00709	142 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	KRT7	P08729	469 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	PIRT	P0C851	137 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	LAMP1	P11279	417 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ETS2	P15036	469 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	MIP	P30301	263 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ACTR1B	P42025	376 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	XCR1	P46094	333 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	UCN	P55089	124 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	TPI1	P60174	286 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	OC90	Q02509	493 aa	Predicted RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	CHRNB3	Q05901	458 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	BCL7A	Q4VC05	210 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	LEMD1	Q68G75	181 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	RNASEK	Q6P5S7	137 aa	Known RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	FAM199X	Q6PEV8	388 aa	Predicted RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ARC	Q7LC44	396 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ZNF571	Q7Z3V5	609 aa	Predicted RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	GKN2	Q86XP6	184 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	POM121L12	Q8N7R1	296 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	OR8K1	Q8NGG5	319 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ZNF564	Q8TBZ8	553 aa	Predicted RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	SLC22A8	Q8TCC7	542 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ST8SIA1	Q92185	356 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	TOMM40L	Q969M1	308 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	FAF2	Q96CS3	445 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	TIMD4	Q96H15	378 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ALS2CR12	Q96Q35	445 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	IL4I1	Q96RQ9	567 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	TRIM62	Q9BVG3	475 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	RIOK2	Q9BVS4	552 aa	Known RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	ILKAP	Q9H0C8	392 aa	Predicted RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	NIPAL2	Q9H841	368 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	CAB39L	Q9H9S4	337 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	KLHL28	Q9NXS3	571 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	SLC39A1	Q9NY26	324 aa		4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	TEP1	Q99973	2627 aa	Known RBP	4.37	□□□□□ -1.71
NRXN1-223	ENST00000625891	HIVEP3	Q5T1R4	2406 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	DCHS2	Q6V1P9	2916 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	UNC79	Q9P2D8	2635 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	CENPE	Q02224	2701 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	LOC100131303	A0A0U1RQF7	123 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891		A0A1W2PPE3	182 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	FRG2C	A6NGY1	282 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	IDS	B3KWA1	339 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891		C9JVG2	144 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891		H0YC42	278 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	MFSD11	O43934	449 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	GALR3	O60755	368 aa	Predicted RBP	4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	SCRG1	O75711	98 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	LSM8	O95777	96 aa	Known RBP	4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	IDS	P22304	550 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	IGHV1-2	P23083	117 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	RANBP1	P43487	201 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	RPL29	P47914	159 aa	Known RBP	4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	BCL2L1	Q07817	233 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	IFFO1	Q0D2I5	559 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	CDC20	Q12834	499 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	IFT88	Q13099	833 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	DYNC1I2	Q13409	638 aa	Known RBP	4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	IL18	Q14116	193 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	ARHGAP19	Q14CB8	494 aa		4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	KCTD19	Q17RG1	926 aa	Predicted RBP	4.36	□□□□□ -1.71
NRXN1-223	ENST00000625891	PYCR3	Q53H96	274 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms