RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 NT5CQ8TCD5 201 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 MALSU1Q96EH3 234 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 NRTNQ99748 197 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 TEX101Q9BY14 249 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 R4GMQ9 66 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 A0A087WZY1 265 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 CCDC163A0A0D9SF12 145 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 SDCBPO00560 298 aaPredicted RBP13.26□□□□□ -0.29
VPS36-207ENST00000611132 THBS2P35442 1172 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 HTRA4P83105 476 aaPredicted RBP13.26□□□□□ -0.29
VPS36-207ENST00000611132 TLE4Q04727 773 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 PRSS53Q2L4Q9 553 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 VWA2Q5GFL6 755 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 RAET1LQ5VY80 246 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 OGFOD3Q6PK18 319 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 DTWD2Q8NBA8 298 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 OR1J1Q8NGS3 322 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 C16orf52Q8NHV5 167 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 EMG1Q92979 244 aaKnown RBP13.26□□□□□ -0.29
VPS36-207ENST00000611132 METTL9Q9H1A3 318 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 ST6GALNAC2Q9UJ37 374 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 FAM96BQ9Y3D0 163 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 PCDHGA5Q9Y5G8 931 aa13.26□□□□□ -0.29
VPS36-207ENST00000611132 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 ZNF705FA8MVS1 300 aaPredicted RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 PRAMEF26H0Y7S4 382 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 TNFSF12O43508 249 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 GLAP06280 429 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 ZNF705DP0CH99 300 aaPredicted RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 ZNF705BP0CI00 300 aaPredicted RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 HOXB3P14651 431 aaPredicted RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 HSD17B7P56937 341 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 MALLQ13021 153 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 IGSF11Q5DX21 431 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 NHLRC3Q5JS37 347 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 OR4N2Q8NGD1 307 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 RSPRY1Q96DX4 576 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 TCTN2Q96GX1 697 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 NKX3-1Q99801 234 aaPredicted RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 NUDT9Q9BW91 350 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 B9D1Q9UPM9 204 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 TMEM272A0A1B0GTI8 110 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 TIMP1P01033 207 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 HOXD4P09016 255 aaPredicted RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 CSNK1A1P48729 337 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 OR52W1Q6IF63 320 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 ABHD6Q9BV23 337 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 SEMA6CQ9H3T2 930 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 RASL12Q9NYN1 266 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 SHISA3A0PJX4 238 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 SULT2B1O00204 365 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 ST8SIA3O43173 380 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 CEACAM5P06731 702 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 NME1P15531 152 aaKnown RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 CNN3Q15417 329 aaKnown RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 ZIC1Q15915 447 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 ZNF74Q16587 644 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 LGI3Q8N145 548 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 KIRREL1Q96J84 757 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 TOX2Q96NM4 488 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 PLEKHA2Q9HB19 425 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 DUX1O43812 170 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 EIF4E2O60573 245 aaKnown RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 SLC2A1P11166 492 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 MECP2P51608 486 aaKnown RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 MTCP1P56278 107 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 PPIAP62937 165 aaKnown RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 INPP5JQ15735 1006 aaPredicted RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 MRM1Q6IN84 353 aaKnown RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 SLC16A13Q7RTY0 426 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 OR14L1PQ8NHC6 308 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 ZNF296Q8WUU4 475 aaPredicted RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 SFT2D1Q8WV19 159 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 SPACA5Q96QH8 159 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 OCSTAMPQ9BR26 566 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 UQCC1Q9NVA1 299 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 DNAJB12Q9NXW2 375 aaKnown RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 SLC5A6Q9Y289 635 aa13.25□□□□□ -0.29
VPS36-207ENST00000611132 POLR2AP24928 1970 aaKnown RBP13.25□□□□□ -0.29
VPS36-207ENST00000611132 C9orf170A2RU37 121 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 GPR137BO60478 399 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 FOSL1P15407 271 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 YPEL5P62699 121 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 RPUSD3Q6P087 351 aaKnown RBP13.24□□□□□ -0.29
VPS36-207ENST00000611132 CHRDQ9H2X0 955 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 CD96P40200 585 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 RFC3P40938 356 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 CDKN2AP42771 156 aaKnown RBP13.24□□□□□ -0.29
VPS36-207ENST00000611132 FABP9Q0Z7S8 132 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 GRINAQ7Z429 371 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 PLXDC1Q8IUK5 500 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 C7orf61Q8IZ16 206 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 BAHD1Q8TBE0 780 aaPredicted RBP13.24□□□□□ -0.29
VPS36-207ENST00000611132 NRSN2Q9GZP1 204 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 S1PR5Q9H228 398 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 DDAH2O95865 285 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 EFNA3P52797 238 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 TANGO2Q6ICL3 276 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 CORO6Q6QEF8 472 aa13.24□□□□□ -0.29
VPS36-207ENST00000611132 ARRDC1Q8N5I2 433 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 232.9 ms