RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 SLC26A7Q8TE54 656 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.09□□□□□ -0.79
PRPF8-208ENST00000573716 COG8Q96MW5 612 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 ZNF582Q96NG8 517 aaPredicted RBP10.09□□□□□ -0.79
PRPF8-208ENST00000573716 ALG12Q9BV10 488 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 SEMA6AQ9H2E6 1030 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 TXNIPQ9H3M7 391 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 TOR3AQ9H497 397 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 TUBG2Q9NRH3 451 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 UFSP2Q9NUQ7 469 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 ERVK-18Q9QC07 812 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 CORO2BQ9UQ03 480 aa10.09□□□□□ -0.79
PRPF8-208ENST00000573716 NOTCH3Q9UM47 2321 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 ELOVL7A1L3X0 281 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 H7C1C5 153 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 MLNRO43193 412 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 HLA-DPB1P04440 258 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 SCG5P05408 212 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 MMP9P14780 707 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 FUT4P22083 530 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 ARF6P62330 175 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 LCN6P62502 163 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 HOXA4Q00056 320 aaPredicted RBP10.08□□□□□ -0.8
PRPF8-208ENST00000573716 SCRN3Q0VDG4 424 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 ALG10Q5BKT4 473 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 PAGE3Q5JUK9 113 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 OTPQ5XKR4 325 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 NKAIN4Q8IVV8 208 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 PNLDC1Q8NA58 520 aaKnown RBP10.08□□□□□ -0.8
PRPF8-208ENST00000573716 C11orf65Q8NCR3 313 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 TMEM255BQ8WV15 326 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 C10orf82Q8WW14 230 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 PPP1R14AQ96A00 147 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 SPDL1Q96EA4 605 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 MAELQ96JY0 434 aaKnown RBP10.08□□□□□ -0.8
PRPF8-208ENST00000573716 PRSS27Q9BQR3 290 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 ZNF426Q9BUY5 554 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 SSU72Q9NP77 194 aaKnown RBP10.08□□□□□ -0.8
PRPF8-208ENST00000573716 POLE4Q9NR33 117 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 C20orf141Q9NUB4 165 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 THAP1Q9NVV9 213 aa10.08□□□□□ -0.8
PRPF8-208ENST00000573716 ADAM20O43506 726 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 FAM20BO75063 409 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 LIPFP07098 398 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 COX5BP10606 129 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 GPX2P18283 190 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 GABRA5P31644 462 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 NPY4RP50391 375 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 TAS2R41P59536 307 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 CTXN1P60606 82 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 RPL27P61353 136 aaKnown RBP10.07□□□□□ -0.8
PRPF8-208ENST00000573716 ZNF181Q2M3W8 571 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 SFRP4Q6FHJ7 346 aaPredicted RBP10.07□□□□□ -0.8
PRPF8-208ENST00000573716 MAVSQ7Z434 540 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 SYT9Q86SS6 491 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 LYG1Q8N1E2 194 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 ITPKCQ96DU7 683 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 SIRPDQ9H106 197 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 PPA2Q9H2U2 334 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 WDR76Q9H967 626 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 NECAP2Q9NVZ3 263 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 AURKAIP1Q9NWT8 199 aaPredicted RBP10.07□□□□□ -0.8
PRPF8-208ENST00000573716 CCDC167Q9P0B6 97 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 CTSZQ9UBR2 303 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 VPREB3Q9UKI3 123 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 FOXJ3Q9UPW0 622 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 SIGLEC9Q9Y336 463 aa10.07□□□□□ -0.8
PRPF8-208ENST00000573716 A0A1W2PRD5 423 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 A0A1W2PRF3 423 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 A0A1W2PRM7 423 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 FBP2O00757 339 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 SHOX2O60902 331 aaPredicted RBP10.06□□□□□ -0.8
PRPF8-208ENST00000573716 TSPAN9O75954 239 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 DBHP09172 617 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 FBP1P09467 338 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 FPR3P25089 353 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 TGFBR2P37173 567 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 PSMB10P40306 273 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 PRB3Q04118 309 aaPredicted RBP10.06□□□□□ -0.8
PRPF8-208ENST00000573716 OR8B8Q15620 311 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 PRAMEF6Q5VXH4 476 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 SLC35E4Q6ICL7 350 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 C11orf87Q6NUJ2 197 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 BLOC1S3Q6QNY0 202 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 FOXL2NBQ6ZUU3 175 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 MICU2Q8IYU8 434 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 OR5L1Q8NGL2 311 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 FNDC8Q8TC99 324 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 TMEM239Q8WW34 195 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 CPPED1Q9BRF8 314 aaPredicted RBP10.06□□□□□ -0.8
PRPF8-208ENST00000573716 RERGLQ9H628 205 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 SMURF1Q9HCE7 757 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 TMEM100Q9NV29 134 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 DNAJB11Q9UBS4 358 aa10.06□□□□□ -0.8
PRPF8-208ENST00000573716 TRBV5-3A0A0A0MS03 114 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 A6NIZ1 184 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 NPIPB13A6NJU9 1138 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 NPIPB4C9JG80 1138 aa10.05□□□□□ -0.8
PRPF8-208ENST00000573716 SNNO75324 88 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms