RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	MED25	Q71SY5	747 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	SLC35F2	Q8IXU6	374 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	ZNF615	Q8N8J6	731 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	SDR9C7	Q8NEX9	313 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	OR51A7	Q8NH64	312 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	ARL11	Q969Q4	196 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	ZC3H10	Q96K80	434 aa	Known RBP	10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	CNTNAP3B	Q96NU0	1288 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	DUSP23	Q9BVJ7	150 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	SLITRK2	Q9H156	845 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	METTL9	Q9H1A3	318 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	LHX6	Q9UPM6	363 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	ZNF281	Q9Y2X9	895 aa		10.79	□□□□□ -0.68
SPG7-222	ENST00000569820	OR2AT4	A6NND4	320 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	XRCC3	O43542	346 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	IGHV2-5	P01817	119 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	MB	P02144	154 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	GUSB	P08236	651 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	OR4E1	P0C645	316 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	GKN3P	P0CG01	181 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	CT45A8	P0DMV1	189 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	CT45A9	P0DMV2	189 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	SLC25A4	P12235	298 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	EDN3	P14138	238 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	ABO	P16442	354 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	GALNS	P34059	522 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	EFNA3	P52797	238 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	ATXN7L3	Q14CW9	347 aa	Predicted RBP	10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	TAF13	Q15543	124 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	HLA-B	Q31612	363 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	CT45A2	Q5DJT8	189 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	PEAR1	Q5VY43	1037 aa	Predicted RBP	10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	DND1	Q8IYX4	353 aa	Known RBP	10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	ZNF561	Q8N587	486 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	C16orf52	Q8NHV5	167 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	ZNF501	Q96CX3	271 aa	Predicted RBP	10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	SEC11C	Q9BY50	192 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	C1orf198	Q9H425	327 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	FKRP	Q9H9S5	495 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	TREM1	Q9NP99	234 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	VSX1	Q9NZR4	365 aa	Predicted RBP	10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	UPB1	Q9UBR1	384 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	PCDHGA1	Q9Y5H4	931 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	IGKV3D-11	A0A0A0MRZ8	115 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	RNF222	A6NCQ9	220 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	OIP5	O43482	229 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	ZNF44	P15621	663 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	PNLIP	P16233	465 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	SDHA	P31040	664 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	PNLIPRP2	P54317	469 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	LTB	Q06643	244 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	PEA15	Q15121	130 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	AARD	Q4LEZ3	155 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	LIN54	Q6MZP7	749 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	ZNF813	Q6ZN06	617 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	ZNF574	Q6ZN55	896 aa	Predicted RBP	10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	TMPRSS11F	Q6ZWK6	438 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	ZSCAN1	Q8NBB4	408 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	OR51L1	Q8NGJ5	315 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	OR5M8	Q8NGP6	311 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	PAQR8	Q8TEZ7	354 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	CA5BP1	Q8WTZ4	195 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	EDA	Q92838	391 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	OR10A5	Q9H207	317 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	FGF21	Q9NSA1	209 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	PISD	Q9UG56	409 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	MMACHC	Q9Y4U1	282 aa		10.78	□□□□□ -0.68
SPG7-222	ENST00000569820	VPS13A	Q96RL7	3174 aa		10.77	□□□□□ -0.68
SPG7-222	ENST00000569820	COLCA2	A8K830	154 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	SMAD9	O15198	467 aa	Known RBP	10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	LYPD3	O95274	346 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	NFYB	P25208	207 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	SRSF3	P84103	164 aa	Known RBP	10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	NR0B2	Q15466	257 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	NNAT	Q16517	81 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	YOD1	Q5VVQ6	348 aa	Predicted RBP	10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	ARHGAP11A	Q6P4F7	1023 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	STAC2	Q6ZMT1	411 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	TMED4	Q7Z7H5	227 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	TMPRSS12	Q86WS5	348 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	RCBTB1	Q8NDN9	531 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	OR8S1	Q8NH09	359 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	OR6X1	Q8NH79	312 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	TSLP	Q969D9	159 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	RHOV	Q96L33	236 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	PTCHD1	Q96NR3	888 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	NCDN	Q9UBB6	729 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	MED31	Q9Y3C7	131 aa		10.77	□□□□□ -0.69
SPG7-222	ENST00000569820	MEIS3P1	A6NDR6	274 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	NUDT19	A8MXV4	375 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	C17orf105	B2RV13	164 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	MCIDAS	D6RGH6	385 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	NPIPB9	F8W1W9	429 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	FGF16	O43320	207 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	ZFPL1	O95159	310 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	CD3D	P04234	171 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	ITGB2	P05107	769 aa		10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	RPS2	P15880	293 aa	Known RBP	10.76	□□□□□ -0.69
SPG7-222	ENST00000569820	ABCD3	P28288	659 aa		10.76	□□□□□ -0.69

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