RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 RNASE11Q8TAA1 199 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 ZBTB8AQ96BR9 441 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 SMIM8Q96KF7 97 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 RBM14Q96PK6 669 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CLCC1Q96S66 551 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 TOLLIPQ9H0E2 274 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 SLCO5A1Q9H2Y9 848 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 SERTAD3Q9UJW9 196 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 CDV3Q9UKY7 258 aaKnown RBP12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 TIMM10BQ9Y5J6 103 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 WIF1Q9Y5W5 379 aa12.56□□□□□ -0.4
RABGGTA-220ENST00000560998 SERINC4A6NH21 518 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 RNASEK-C17orf49H0YIS7 233 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 GPR37O15354 613 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 ZNF432O94892 652 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 RAB3DO95716 219 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 WNT11O96014 354 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 CD5P06127 495 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 FAM157CP0CG43 387 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 TMIGD3P0DMS9 266 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 CSRP1P21291 193 aaKnown RBP12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 CD1CP29017 333 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 GALNSP34059 522 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 NXPH1P58417 271 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 SGCAQ16586 387 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC35D3Q5M8T2 416 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 EEF1A1P5Q5VTE0 462 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 NKAIN2Q5VXU1 208 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 UNQ6126/PRO20091Q6UXV3 157 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 TMPRSS12Q86WS5 348 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 C1QL4Q86Z23 238 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 OR4C3Q8NH37 302 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 GPX8Q8TED1 209 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 FOXRED1Q96CU9 486 aaPredicted RBP12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 MESP1Q9BRJ9 268 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 TMEM231Q9H6L2 316 aa12.55□□□□□ -0.4
RABGGTA-220ENST00000560998 A0A1W2PPE3 182 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 EIF1AYO14602 144 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 ZNF208O43345 1280 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 CDC40O60508 579 aaKnown RBP eCLIP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 IFNA10P01566 189 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 RAB5AP20339 215 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 EIF1AXP47813 144 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC6A9P48067 706 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 CD81P60033 236 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 HNRNPKP61978 463 aaKnown RBP eCLIP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 EIF5AP63241 154 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 C14orf28Q4W4Y0 310 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 LBHQ53QV2 105 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 ATPAF1Q5TC12 328 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 OR52W1Q6IF63 320 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 EIF5AL1Q6IS14 154 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 SSX9Q7RTT3 188 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 CYB561A3Q8NBI2 242 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 RGP1Q92546 391 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 THRSPQ92748 146 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 RAB3CQ96E17 227 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 ZMYND19Q96E35 227 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 WDR77Q9BQA1 342 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 NAA11Q9BSU3 229 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 FOXQ1Q9C009 403 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 RAB33BQ9H082 229 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 TSPAN10Q9H1Z9 355 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 PRODH2Q9UF12 536 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 PCDHGA1Q9Y5H4 931 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 TRBV5-5A0A0J9YX44 114 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 TVP23AA6NH52 213 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 CSTAP01040 98 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 IL2RAP01589 272 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 HLA-AP01891 365 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC2A1P11166 492 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 LAP3P28838 519 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 RIDAP52758 137 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 TAS2R60P59551 318 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 KCNAB1Q14722 419 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 ATXN7L3Q14CW9 347 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 LRRC37A5PQ49AS3 106 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 FAHD2BQ6P2I3 314 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC29A4Q7RTT9 530 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 TMED4Q7Z7H5 227 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 LYG2Q86SG7 212 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 PAQR4Q8N4S7 273 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 ZNF417Q8TAU3 575 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 FAHD2AQ96GK7 314 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 OR5B2Q96R09 309 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 TTTY10Q9BZA0 68 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 LANCL2Q9NS86 450 aa12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 MRPS17Q9Y2R5 130 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-220ENST00000560998 CEP192Q8TEP8 1941 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 HEATR5AQ86XA9 2040 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 SLC31A2O15432 143 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 FBXO24O75426 580 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 ZFPL1O95159 310 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 GYPBP06028 91 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 ADRA2CP18825 462 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 AVPR2P30518 371 aa12.53□□□□□ -0.4
RABGGTA-220ENST00000560998 PSMB10P40306 273 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms