RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 FAM206AQ9NX38 181 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 ABRACLQ9P1F3 81 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 COMMD3Q9UBI1 195 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 CKLFQ9UBR5 152 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 FBXL3Q9UKT7 428 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 SLC22A13Q9Y226 551 aa12.15□□□□□ -0.46
TPM1-215ENST00000558868 SMIM30A4D0T7 59 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 ZNF587BE7ETH6 402 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 RPL36A-HNRNPH2H7BZ11 118 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 RER1O15258 196 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 PIN1P1O15428 100 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 CRYABP02511 175 aaKnown RBP12.14□□□□□ -0.47
TPM1-215ENST00000558868 PTBP1P26599 531 aaKnown RBP eCLIP12.14□□□□□ -0.47
TPM1-215ENST00000558868 NTF4P34130 210 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 SOX2P48431 317 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 ZNF181Q2M3W8 571 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 CEACAM16Q2WEN9 425 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 ELFN2Q5R3F8 820 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 P4HA3Q7Z4N8 544 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 TUSC5Q8IXB3 177 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 ELMOD2Q8IZ81 293 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 PARP16Q8N5Y8 322 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 SPTSSAQ969W0 71 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 TMEM106AQ96A25 262 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 APH1AQ96BI3 265 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 DIRAS2Q96HU8 199 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 FOXB1Q99853 325 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 PBOV1Q9GZY1 135 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 HDHD2Q9H0R4 259 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 CALHM2Q9HA72 323 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 UPB1Q9UBR1 384 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 NUFIP1Q9UHK0 495 aaKnown RBP12.14□□□□□ -0.47
TPM1-215ENST00000558868 CEP295Q9C0D2 2601 aa12.14□□□□□ -0.47
TPM1-215ENST00000558868 A0A0G2JK05 382 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 OR14I1A6ND48 311 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 EPXP11678 715 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 ZNF12P17014 697 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 UCNP55089 124 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 RAB35Q15286 201 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 C3AR1Q16581 482 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 ODF4Q2M2E3 257 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 TSPO2Q5TGU0 170 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 LUZP2Q86TE4 346 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 LAX1Q8IWV1 398 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 ZNF100Q8IYN0 542 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 RDH10Q8IZV5 341 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 LRRC18Q8N456 261 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 ZNF283Q8N7M2 679 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 CCDC54Q8NEL0 328 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 OR13C3Q8NGS6 347 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 CMTM3Q96MX0 182 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
TPM1-215ENST00000558868 CCDC32Q9BV29 185 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 MIXL1Q9H2W2 232 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 SP140LQ9H930 580 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 PNRC2Q9NPJ4 139 aaKnown RBP12.13□□□□□ -0.47
TPM1-215ENST00000558868 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 DAPK2Q9UIK4 370 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 LHX6Q9UPM6 363 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 FOXJ3Q9UPW0 622 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 AK6Q9Y3D8 172 aaKnown RBP12.13□□□□□ -0.47
TPM1-215ENST00000558868 TIMM10BQ9Y5J6 103 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 V9GY05 133 aa12.13□□□□□ -0.47
TPM1-215ENST00000558868 A0A1B0GVI7 797 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 LOC107986453A0A1B0GWG9 222 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 ISPDA4D126 451 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 FABP12A6NFH5 140 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 ANXA2P2A6NMY6 339 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 TTLL8A6PVC2 850 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 UPK1BO75841 260 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 ANXA2P07355 339 aaKnown RBP12.12□□□□□ -0.47
TPM1-215ENST00000558868 FSTP19883 344 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 TALDO1P37837 337 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 RANBP1P43487 201 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 CX3CR1P49238 355 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 OR10A3P58181 314 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 CCDC92Q53HC0 331 aaPredicted RBP12.12□□□□□ -0.47
TPM1-215ENST00000558868 CEP78Q5JTW2 689 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 XKRXQ6PP77 449 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 FAM131AQ6UXB0 335 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 STAC2Q6ZMT1 411 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 NR2C2APQ86WQ0 139 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 SIAH3Q8IW03 269 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 ZNF433Q8N7K0 673 aaPredicted RBP12.12□□□□□ -0.47
TPM1-215ENST00000558868 ASB5Q8WWX0 329 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 GMPPAQ96IJ6 420 aaPredicted RBP12.12□□□□□ -0.47
TPM1-215ENST00000558868 PLEK2Q9NYT0 353 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 IGF2RP11717 2491 aa12.12□□□□□ -0.47
TPM1-215ENST00000558868 MEGF11A6BM72 1044 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 AHRRA9YTQ3 701 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 FAM25AB3EWG3 89 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 FAM25CB3EWG5 89 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 FAM25GB3EWG6 89 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 K7ENP7 123 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 AIPO00170 330 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 SGCEO43556 437 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 SYT7O43581 403 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 HPGDSO60760 199 aa12.11□□□□□ -0.47
TPM1-215ENST00000558868 TTRP02766 147 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms