RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 HSBP1O75506 76 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 CIAO1O76071 339 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 SERPINA5P05154 406 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 CHTF8P0CG12 524 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 CPN2P22792 545 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 F2RP25116 425 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 U2AF2P26368 475 aaKnown RBP eCLIP3.36□□□□□ -1.873e-7■■□□□ 12.6
PABPN1-204ENST00000554062 HTR1EP28566 365 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 RORCP51449 518 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 PRPS1P60891 318 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 ACTA2P62736 377 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 ACTG2P63267 376 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 ACTC1P68032 377 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 ACTA1P68133 377 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 IFT88Q13099 833 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 THEM4Q5T1C6 240 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 OR52W1Q6IF63 320 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 ULK3Q6PHR2 472 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 OR5T3Q8NGG3 340 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 OR6X1Q8NH79 312 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 LKAAEAR1Q8TD35 194 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 CAPSLQ8WWF8 208 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 MED8Q96G25 268 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 SLC35E1Q96K37 410 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 COA1Q9GZY4 146 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 PARP12Q9H0J9 701 aaKnown RBP3.36□□□□□ -1.87
PABPN1-204ENST00000554062 STMN4Q9H169 189 aaPredicted RBP3.36□□□□□ -1.87
PABPN1-204ENST00000554062 XKR8Q9H6D3 395 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 CYP3A43Q9HB55 503 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 CD209Q9NNX6 404 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 SLC7A10Q9NS82 523 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 AHSPQ9NZD4 102 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 MYO3BQ8WXR4 1341 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 HCFC1P51610 2035 aa3.36□□□□□ -1.87
PABPN1-204ENST00000554062 MYO5AQ9Y4I1 1855 aaKnown RBP3.35□□□□□ -1.87
PABPN1-204ENST00000554062 PTPRFP10586 1907 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 CHD7Q9P2D1 2997 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 MYH13Q9UKX3 1938 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 TRAV6A0A075B6T7 132 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 ZNF726A6NNF4 738 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 FKBP6O75344 327 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 KLF8O95600 359 aaPredicted RBP3.35□□□□□ -1.87
PABPN1-204ENST00000554062 DCNP07585 359 aaKnown RBP3.35□□□□□ -1.87
PABPN1-204ENST00000554062 RETP07949 1114 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 TPM1P09493 284 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 ACSM4P0C7M7 580 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 PNMA6AP0CW24 399 aaPredicted RBP3.35□□□□□ -1.87
PABPN1-204ENST00000554062 TDGF1P13385 188 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 CD82P27701 267 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 TDGF1P3P51864 188 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 QPRTQ15274 297 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 RFX4Q33E94 735 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 ZBED5Q49AG3 693 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 CCNJQ5T5M9 372 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 UBE2UQ5VVX9 321 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 OTPQ5XKR4 325 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 ASCL5Q7RTU5 278 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 CMTM1Q8IZ96 169 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 FAM151AQ8WW52 585 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 GEMIN6Q8WXD5 167 aaKnown RBP3.35□□□□□ -1.87
PABPN1-204ENST00000554062 DCUN1D4Q92564 292 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 NDRG1Q92597 394 aaKnown RBP3.35□□□□□ -1.87
PABPN1-204ENST00000554062 CERS2Q96G23 380 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 SERPINB12Q96P63 405 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 OR5B12Q96R08 314 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 UCK2Q9BZX2 261 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 MYOZ2Q9NPC6 264 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 CTPS2Q9NRF8 586 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 CCL28Q9NRJ3 127 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 ADAM22Q9P0K1 906 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 KCNE3Q9Y6H6 103 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 DOCK3Q8IZD9 2030 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 MROH7-TTC4A0A0A0MT08 1334 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 ZBED9Q6R2W3 1325 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 PHIPQ8WWQ0 1821 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 CDK5RAP2Q96SN8 1893 aa3.35□□□□□ -1.87
PABPN1-204ENST00000554062 FAM231BA6NCW3 169 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 A6NDN8 102 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 TRIM49D1C9J1S8 452 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 HAT1O14929 419 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 CLDN11O75508 207 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 FCN3O75636 299 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 LY6G6DO95868 133 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 C6orf47O95873 294 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 HBE1P02100 147 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 SERPINE2P07093 398 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 UBTFL6P0CB48 400 aaPredicted RBP3.34□□□□□ -1.87
PABPN1-204ENST00000554062 RGS19P49795 217 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 BCAP31P51572 246 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 CARD18P57730 90 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 NUP107P57740 925 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 LYZP61626 148 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 SP4Q02446 784 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 AQP6Q13520 282 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 OR7A5Q15622 319 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 CCDC14Q49A88 953 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 C9orf129Q5T035 196 aaKnown RBP3.34□□□□□ -1.87
PABPN1-204ENST00000554062 FKBP1CQ5VVH2 108 aa3.34□□□□□ -1.87
PABPN1-204ENST00000554062 SPECC1LQ69YQ0 1117 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms