RNA–Protein interactions for RNA: ENST00000544967.5

USP28-213, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-213ENST00000544967 PYY3Q5JQD4 70 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 MBOAT1Q6ZNC8 495 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 SLC29A4Q7RTT9 530 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 PRSS45Q7RTY3 260 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 NRROSQ86YC3 692 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 TMEM99Q8N816 258 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 ACOT4Q8N9L9 421 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 CLEC1AQ8NC01 280 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 OR8G5Q8NG78 346 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 OR4K1Q8NGD4 311 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 SYNPRQ8TBG9 265 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 M1APQ8TC57 530 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 GPX8Q8TED1 209 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 MITD1Q8WV92 249 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 SLAMF9Q96A28 289 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 SLC25A28Q96A46 364 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 C3orf49Q96BT1 292 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 SGPP1Q9BX95 441 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 GPR174Q9BXC1 333 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 RAB33BQ9H082 229 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 BEX1Q9HBH7 125 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 MBNL1Q9NR56 388 aaKnown RBP4.74□□□□□ -1.65
USP28-213ENST00000544967 CYTL1Q9NRR1 136 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 ANKRD10Q9NXR5 420 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 IGLON5A6NGN9 336 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 OR6C76A6NM76 312 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 H3BML4 177 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 TCAPO15273 167 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 SYT7O43581 403 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 CATP04040 527 aaKnown RBP4.74□□□□□ -1.65
USP28-213ENST00000544967 RNF224P0DH78 156 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 TBPP20226 339 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 DCTDP32321 178 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 SOAT1P35610 550 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 PRLHRP49683 370 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 GNG10P50151 68 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 TAS2R41P59536 307 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 B4GALNT1Q00973 533 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 CDCP2Q5VXM1 449 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 NKAIN2Q5VXU1 208 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 C18orf63Q68DL7 685 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 OR52W1Q6IF63 320 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 VHLLQ6RSH7 139 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 AGTRAPQ6RW13 159 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 DND1Q8IYX4 353 aaKnown RBP4.74□□□□□ -1.65
USP28-213ENST00000544967 ZFP82Q8N141 532 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 OR51G2Q8NGK0 314 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 RNF125Q96EQ8 232 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 GALNT14Q96FL9 552 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 SLC35G5Q96KT7 338 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 C4orf36Q96KX1 117 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 WDR77Q9BQA1 342 aaPredicted RBP4.74□□□□□ -1.65
USP28-213ENST00000544967 APOOQ9BUR5 198 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 TPSD1Q9BZJ3 242 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 CHRNA10Q9GZZ6 450 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 UBQLN4Q9NRR5 601 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 OR5V1Q9UGF6 321 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 STARD10Q9Y365 291 aa4.74□□□□□ -1.65
USP28-213ENST00000544967 TRBV5-5A0A0J9YX44 114 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 OIP5O43482 229 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 SRPX2O60687 465 aaPredicted RBP4.73□□□□□ -1.65
USP28-213ENST00000544967 ANXA2P07355 339 aaKnown RBP4.73□□□□□ -1.65
USP28-213ENST00000544967 IFI6P09912 130 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 ELFN1P0C7U0 828 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 TBC1D3HP0C7X1 549 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 COX5BP10606 129 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 ERGP11308 486 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 DAOP14920 347 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 CPT2P23786 658 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 GABRR1P24046 479 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 CD34P28906 385 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 PRKXP51817 358 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 TAS2R31P59538 309 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 SIRPAP78324 504 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 AIMP2Q13155 320 aaKnown RBP4.73□□□□□ -1.65
USP28-213ENST00000544967 MELKQ14680 651 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 PLEKHN1Q494U1 663 aaPredicted RBP4.73□□□□□ -1.65
USP28-213ENST00000544967 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.73□□□□□ -1.65
USP28-213ENST00000544967 TBC1D3GQ6DHY5 549 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 KLHL24Q6TFL4 600 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 LCTLQ6UWM7 567 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 PET117Q6UWS5 81 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 FAM151BQ6UXP7 276 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 HEPN1Q6WQI6 88 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 LYG2Q86SG7 212 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 SLC25A42Q86VD7 318 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 C19orf47Q8N9M1 422 aaKnown RBP4.73□□□□□ -1.65
USP28-213ENST00000544967 OR4K17Q8NGC6 315 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 PTX4Q96A99 478 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 ZNF514Q96K75 400 aaPredicted RBP4.73□□□□□ -1.65
USP28-213ENST00000544967 F2RL3Q96RI0 385 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 GFI1Q99684 422 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 NDUFAF3Q9BU61 184 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 ACTRT3Q9BYD9 372 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 BPIFA1Q9NP55 256 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 CENPMQ9NSP4 180 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 KLHL28Q9NXS3 571 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 CNIH4Q9P003 139 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 KLK11Q9UBX7 282 aa4.73□□□□□ -1.65
USP28-213ENST00000544967 SERTAD3Q9UJW9 196 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms