RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 CMAHPQ9Y471 501 aa16.75■□□□□ 0.27
DDX55-207ENST00000540763 GMPPBQ9Y5P6 360 aa16.75■□□□□ 0.27
DDX55-207ENST00000540763 ARFGEF3Q5TH69 2177 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 LOC100130705A0A1B0GUX0 176 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 B9A039 149 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 ZNF878C9JN71 531 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 OVOL3O00110 214 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 MPZL2O60487 215 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 CCNOP22674 350 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 SERPINF1P36955 418 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 WNT5AP41221 380 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 EVX1P49640 407 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 NUDT6P53370 316 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 SNRPGP62308 76 aaKnown RBP16.74■□□□□ 0.27
DDX55-207ENST00000540763 RIPK1Q13546 671 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 MEDAGQ5VYS4 303 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 SLC16A9Q7RTY1 509 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 DPY19L4Q7Z388 723 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 ZNF555Q8NEP9 628 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 OR10S1Q8NGN2 331 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 OTOSQ8NHW6 89 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 RFKQ969G6 155 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 MRPL24Q96A35 216 aaKnown RBP16.74■□□□□ 0.27
DDX55-207ENST00000540763 YIPF3Q9GZM5 350 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 NKX1-2Q9UD57 310 aaPredicted RBP16.74■□□□□ 0.27
DDX55-207ENST00000540763 WARS2Q9UGM6 360 aaKnown RBP16.74■□□□□ 0.27
DDX55-207ENST00000540763 LAMP3Q9UQV4 416 aa16.74■□□□□ 0.27
DDX55-207ENST00000540763 GPRIN2O60269 458 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 ABHD16AO95870 558 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 CD8AP01732 235 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 OR4A8P0C604 315 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 BMP4P12644 408 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 HTR1FP30939 366 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 OTX1P32242 354 aaPredicted RBP16.73■□□□□ 0.27
DDX55-207ENST00000540763 RPS27P42677 84 aaKnown RBP16.73■□□□□ 0.27
DDX55-207ENST00000540763 POU4F2Q12837 409 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 SWI5Q1ZZU3 235 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 DEFB113Q30KQ7 82 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 RGS7BPQ6MZT1 257 aaPredicted RBP16.73■□□□□ 0.27
DDX55-207ENST00000540763 VHLLQ6RSH7 139 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 ZNF101Q8IZC7 436 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 LRRC75A-AS1Q8N1F1 130 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 GALNT4Q8N4A0 578 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 MNTQ99583 582 aa16.73■□□□□ 0.27
DDX55-207ENST00000540763 SELENOFO60613 162 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 FAM157BP0CG42 384 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 ZNF250P15622 560 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 GRB2P62993 217 aaKnown RBP16.72■□□□□ 0.27
DDX55-207ENST00000540763 EIF2B1Q14232 305 aaKnown RBP16.72■□□□□ 0.27
DDX55-207ENST00000540763 OCLNQ16625 522 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 TTC23Q5W5X9 447 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 OR1J1Q8NGS3 322 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 RNF133Q8WVZ7 376 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 SPTSSAQ969W0 71 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 SLAMF6Q96DU3 332 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 ZNF582Q96NG8 517 aaPredicted RBP16.72■□□□□ 0.27
DDX55-207ENST00000540763 CNN2Q99439 309 aaKnown RBP16.72■□□□□ 0.27
DDX55-207ENST00000540763 FOXC2Q99958 501 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 APOL4Q9BPW4 351 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 GSX2Q9BZM3 304 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 PLK3Q9H4B4 646 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 ZNF701Q9NV72 531 aaPredicted RBP16.72■□□□□ 0.27
DDX55-207ENST00000540763 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX55-207ENST00000540763 TMEM14AQ9Y6G1 99 aa16.72■□□□□ 0.27
DDX55-207ENST00000540763 IGLV3-9A0A075B6K5 115 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 H0YJX3 145 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 RRP9O43818 475 aaKnown RBP16.71■□□□□ 0.27
DDX55-207ENST00000540763 LYNP07948 512 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 NAA10P41227 235 aaPredicted RBP16.71■□□□□ 0.27
DDX55-207ENST00000540763 SLC15A1P46059 708 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 PPP1CBP62140 327 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 SNRPD2P62316 118 aaKnown RBP16.71■□□□□ 0.27
DDX55-207ENST00000540763 RSPO1Q2MKA7 263 aaPredicted RBP16.71■□□□□ 0.27
DDX55-207ENST00000540763 MST1LQ2TV78 715 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 TMEM154Q6P9G4 183 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 COLCA1Q6ZS62 124 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 RFPL4BQ6ZWI9 263 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 BCDIN3DQ7Z5W3 292 aaKnown RBP16.71■□□□□ 0.27
DDX55-207ENST00000540763 SLC7A6Q92536 515 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 ABHD6Q9BV23 337 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 C1QTNF5Q9BXJ0 243 aa16.71■□□□□ 0.27
DDX55-207ENST00000540763 SETD2Q9BYW2 2564 aaPredicted RBP16.71■□□□□ 0.26
DDX55-207ENST00000540763 SNTNA6NMZ2 147 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 H7C417 338 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 LCKP06239 509 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 DBHP09172 617 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 ACSM4P0C7M7 580 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 GABRB1P18505 474 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 ALOX5APP20292 161 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 TPTEP56180 551 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 SELENOVP59797 346 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 IL18R1Q13478 541 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 MBNL2Q5VZF2 373 aaKnown RBP16.7■□□□□ 0.26
DDX55-207ENST00000540763 DRAM2Q6UX65 266 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 ENTHD1Q8IYW4 607 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 DHRSXQ8N5I4 330 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 RHOXF1Q8NHV9 184 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 ABHD4Q8TB40 342 aa16.7■□□□□ 0.26
DDX55-207ENST00000540763 APOBEC3DQ96AK3 386 aaPredicted RBP16.7■□□□□ 0.26
DDX55-207ENST00000540763 MARS2Q96GW9 593 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms