RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 SGCAQ16586 387 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 IP6K3Q96PC2 410 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 UTP23Q9BRU9 249 aaKnown RBP22.88■■□□□ 1.25
COL13A1-214ENST00000522165 ZNF416Q9BWM5 594 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 NUFIP1Q9UHK0 495 aaKnown RBP22.88■■□□□ 1.25
COL13A1-214ENST00000522165 CDV3Q9UKY7 258 aaKnown RBP22.88■■□□□ 1.25
COL13A1-214ENST00000522165 FREM2Q5SZK8 3169 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 ORC5O43913 435 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 TMIGD3P0DMS9 266 aaPredicted RBP22.88■■□□□ 1.25
COL13A1-214ENST00000522165 HLA-DMAP28067 261 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 GDNFP39905 211 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 POU3F4P49335 361 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 TAF13Q15543 124 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 CNTRLQ7Z7A1 2325 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 OR51A2Q8NGJ7 313 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 UBASH3BQ8TF42 649 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 GCDHQ92947 438 aaPredicted RBP22.88■■□□□ 1.25
COL13A1-214ENST00000522165 NKD1Q969G9 470 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 FAM3DQ96BQ1 224 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 INTS12Q96CB8 462 aaKnown RBP22.88■■□□□ 1.25
COL13A1-214ENST00000522165 FAM173AQ9BQD7 235 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 MOB1AQ9H8S9 216 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 ZNF275Q9NSD4 429 aaPredicted RBP22.88■■□□□ 1.25
COL13A1-214ENST00000522165 ABI3Q9P2A4 366 aa22.88■■□□□ 1.25
COL13A1-214ENST00000522165 MEGF11A6BM72 1044 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 TPPPO94811 219 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 MSR1P21757 451 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 GUCA1AP43080 201 aaPredicted RBP22.87■■□□□ 1.25
COL13A1-214ENST00000522165 STARP49675 285 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 AIMP2Q13155 320 aaKnown RBP22.87■■□□□ 1.25
COL13A1-214ENST00000522165 OR2M7Q8NG81 312 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 OR52I2Q8NH67 350 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 OR2V1Q8NHB1 315 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 SLC25A28Q96A46 364 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 PNPLA2Q96AD5 504 aa22.87■■□□□ 1.25
COL13A1-214ENST00000522165 C7orf50Q9BRJ6 194 aaKnown RBP22.87■■□□□ 1.25
COL13A1-214ENST00000522165 INMT-MINDY4F8WBC2 141 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 DHHO43323 396 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 GFRA1P56159 465 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 TAS2R20P59543 309 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 DYRK1AQ13627 763 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 C2orf76Q3KRA6 126 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 NELFAQ9H3P2 528 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 ALG5Q9Y673 324 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 LOC100289279A0A1B0GTE1 492 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 CXCL13O43927 109 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 POU3F2P20265 443 aaPredicted RBP22.86■■□□□ 1.25
COL13A1-214ENST00000522165 PRKXP51817 358 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 EFNB2P52799 333 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 NUBP1P53384 320 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 MRPS10P82664 201 aaKnown RBP22.86■■□□□ 1.25
COL13A1-214ENST00000522165 ANKRD16Q6P6B7 361 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 C20orf196Q8IYI0 205 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 C15orf40Q8WUR7 153 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 SLC7A6Q92536 515 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 NABP1Q96AH0 204 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 ST6GAL2Q96JF0 529 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 FAM210AQ96ND0 272 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 ZNF221Q9UK13 617 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 ZNF318Q5VUA4 2279 aa22.86■■□□□ 1.25
COL13A1-214ENST00000522165 SYT7O43581 403 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 KRT33AO76009 404 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 CLDN15P56746 228 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 TBRG1Q3YBR2 411 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 IL22RA1Q8N6P7 574 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 OR10D3Q8NH80 312 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 FCAMRQ8WWV6 532 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 NKX3-1Q99801 234 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-214ENST00000522165 RBMX2Q9Y388 322 aaKnown RBP22.85■■□□□ 1.25
COL13A1-214ENST00000522165 FLVCR1Q9Y5Y0 555 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 XRCC3O43542 346 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 GLSO94925 669 aaPredicted RBP22.85■■□□□ 1.25
COL13A1-214ENST00000522165 HTR2CP28335 458 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 BTG1P62324 171 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 SPOCK1Q08629 439 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 OR1C1Q15619 314 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 ATAD3CQ5T2N8 411 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 LUZP2Q86TE4 346 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 FGGYQ96C11 551 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 DPAGT1Q9H3H5 408 aa22.85■■□□□ 1.25
COL13A1-214ENST00000522165 A0A1B0GTI1 187 aa22.84■■□□□ 1.25
COL13A1-214ENST00000522165 ZNF716A6NP11 495 aa22.84■■□□□ 1.25
COL13A1-214ENST00000522165 CTAG2O75638 210 aa22.84■■□□□ 1.25
COL13A1-214ENST00000522165 ZNF121P58317 390 aaPredicted RBP22.84■■□□□ 1.25
COL13A1-214ENST00000522165 ENDOGQ14249 297 aaKnown RBP22.84■■□□□ 1.25
COL13A1-214ENST00000522165 GLYATL3Q5SZD4 288 aa22.84■■□□□ 1.25
COL13A1-214ENST00000522165 ZNF775Q96BV0 537 aaPredicted RBP22.84■■□□□ 1.25
COL13A1-214ENST00000522165 RBM24Q9BX46 236 aaKnown RBP22.84■■□□□ 1.25
COL13A1-214ENST00000522165 ULBP2Q9BZM5 246 aa22.84■■□□□ 1.25
COL13A1-214ENST00000522165 KCNK15Q9H427 330 aa22.84■■□□□ 1.25
COL13A1-214ENST00000522165 SLC17A5Q9NRA2 495 aa22.84■■□□□ 1.25
COL13A1-214ENST00000522165 CGGBP1Q9UFW8 167 aaPredicted RBP22.84■■□□□ 1.25
COL13A1-214ENST00000522165 OTOGLQ3ZCN5 2332 aa22.84■■□□□ 1.25
COL13A1-214ENST00000522165 GRB2P62993 217 aaKnown RBP22.83■■□□□ 1.25
COL13A1-214ENST00000522165 ABLIM2Q6H8Q1 611 aa22.83■■□□□ 1.25
COL13A1-214ENST00000522165 ZBTB8BQ8NAP8 495 aaPredicted RBP22.83■■□□□ 1.25
COL13A1-214ENST00000522165 DEFB124Q8NES8 71 aa22.83■■□□□ 1.25
COL13A1-214ENST00000522165 OR6M1Q8NGM8 313 aa22.83■■□□□ 1.25
COL13A1-214ENST00000522165 OR51E1Q8TCB6 317 aa22.83■■□□□ 1.25
COL13A1-214ENST00000522165 ROBO4Q8WZ75 1007 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms