RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 C7orf34Q96L11 122 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 ZNF582Q96NG8 517 aaPredicted RBP11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 MRI1Q9BV20 369 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 HCAR1Q9BXC0 346 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 NUAK2Q9H093 628 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 RERGLQ9H628 205 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 PATZ1Q9HBE1 687 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 ZNF446Q9NWS9 450 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 IL20RAQ9UHF4 553 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 KCNG2Q9UJ96 466 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 TMCC3Q9ULS5 477 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 NOP16Q9Y3C1 178 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 IER3IP1Q9Y5U9 82 aa11.49□□□□□ -0.57
CCHCR1-227ENST00000508852 NBEAL1Q6ZS30 2694 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 SOCS2O14508 198 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 GADD45GO95257 159 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 NCK1P16333 377 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 ZNF26P17031 533 aaPredicted RBP11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 FPR3P25089 353 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 NOS3P29474 1203 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 LCN2P80188 198 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 ZNF181Q2M3W8 571 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 RFX4Q33E94 735 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 CCDC92Q53HC0 331 aaPredicted RBP11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 ESCO2Q56NI9 601 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 SAMD4BQ5PRF9 694 aaKnown RBP11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 RPL13AP3Q6NVV1 102 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 C1orf229Q6ZS94 237 aaPredicted RBP11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 ATG16L2Q8NAA4 619 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 OR8G5Q8NG78 346 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 OR2AJ1Q8NGZ0 328 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 FANK1Q8TC84 345 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 ERGIC1Q969X5 290 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 ERMAPQ96PL5 475 aaPredicted RBP11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 CDADC1Q9BWV3 514 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 MYLK2Q9H1R3 596 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 EGFL7Q9UHF1 273 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 LRCH1Q9Y2L9 728 aa11.48□□□□□ -0.57
CCHCR1-227ENST00000508852 TMEM89A2RUT3 159 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 A8MXK9 166 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 KRT36O76013 467 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 PPIAL4GP0DN37 164 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 HSD17B1P14061 328 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 FUT4P22083 530 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 SLC6A9P48067 706 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 CENPAP49450 140 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 HIST1H3AP68431 136 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 COX10Q12887 443 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 MALLQ13021 153 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 ARMCX4Q5H9R4 360 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 TMEM255AQ5JRV8 349 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 HIST2H3PS2Q5TEC6 136 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 C1orf94Q6P1W5 598 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 HIST2H3AQ71DI3 136 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 TSEN54Q7Z6J9 526 aaKnown RBP11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 CELF2-AS1Q8N7Q2 184 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 C3orf56Q8N813 242 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 ITLN1Q8WWA0 313 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 PLEKHA8Q96JA3 519 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 OR2V2Q96R30 315 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 ELAC2Q9BQ52 826 aaKnown RBP11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 SLC22A4Q9H015 551 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 DDX28Q9NUL7 540 aaKnown RBP11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 TMEM100Q9NV29 134 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 GMPR2Q9P2T1 348 aaKnown RBP11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 MIOXQ9UGB7 285 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 OR5V1Q9UGF6 321 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 B9D1Q9UPM9 204 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 AUP1Q9Y679 476 aa11.47□□□□□ -0.57
CCHCR1-227ENST00000508852 TRBV4-1A0A0J9YWV2 114 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 IQCF6A8MYZ5 107 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 TMEM178BH3BS89 294 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 RER1O15258 196 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 OR10H3O60404 316 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 AVPP01185 164 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 FSHBP01225 129 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 FABP3P05413 133 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 IRF2P14316 349 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 CFPP27918 469 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 CDKN2AP42771 156 aaKnown RBP11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 MNAT1P51948 309 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 SPIBQ01892 262 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 ZNF154Q13106 437 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 LEG1Q6P5S2 330 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 BTNL3Q6UXE8 466 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 LRRN1Q6UXK5 716 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 Q6ZR03 302 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 PTCHD4Q6ZW05 846 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 CPLX4Q7Z7G2 160 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 ZBTB46Q86UZ6 589 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 OR52J3Q8NH60 311 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 SGMS2Q8NHU3 365 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 GNPDA2Q8TDQ7 276 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 NSMCE2Q96MF7 247 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 SLC30A2Q9BRI3 323 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 FUZQ9BT04 418 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 IFT27Q9BW83 186 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 C1QTNF5Q9BXJ0 243 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 OR52D1Q9H346 318 aa11.46□□□□□ -0.57
CCHCR1-227ENST00000508852 GCM1Q9NP62 436 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms